RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PFKMP08237 780 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 MC4RP32245 332 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 GDNFP39905 211 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 RGS3P49796 1198 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 SLC16A1P53985 500 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 CDK17Q00537 523 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 DHX8Q14562 1220 aaKnown RBP6.9□□□□□ -1.3
TUBD1-208ENST00000588009 LLGL1Q15334 1064 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 ANO4Q32M45 955 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 OVCH2Q7RTZ1 564 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 SLC41A1Q8IVJ1 513 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 PPP1R35Q8TAP8 253 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 PCMTD2Q9NV79 361 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 PRSS50Q9UI38 385 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 DBR1Q9UK59 544 aaKnown RBP6.9□□□□□ -1.3
TUBD1-208ENST00000588009 PHTF1Q9UMS5 762 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 DAAM1Q9Y4D1 1078 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 MYPNQ86TC9 1320 aa6.9□□□□□ -1.3
TUBD1-208ENST00000588009 H3BML4 177 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 COBLO75128 1261 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 TUSC2O75896 110 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 MPIG6BO95866 241 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 GALK1P51570 392 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 SLC9A5Q14940 896 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 VSIG10LQ86VR7 867 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 CAMKK1Q8N5S9 505 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 FAM156AQ8NDB6 213 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 ACE2Q9BYF1 805 aaPredicted RBP6.89□□□□□ -1.31
TUBD1-208ENST00000588009 DTLQ9NZJ0 730 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 HSPBP1Q9NZL4 362 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 ARHGAP28Q9P2N2 729 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 CCDC39Q9UFE4 941 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 INTUQ9ULD6 942 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 DENND2AQ9ULE3 1009 aa6.89□□□□□ -1.31
TUBD1-208ENST00000588009 KRTAP9-6A0A140TA67 174 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 DTNBO60941 627 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 LRG1P02750 347 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 PTGS1P23219 599 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 SERPINB3P29508 390 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 BCAR1P56945 870 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 GJA9P57773 515 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 SPIDRQ14159 915 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 NR1I3Q14994 352 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 C4orf46Q504U0 113 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 CD276Q5ZPR3 534 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 DENND1CQ8IV53 801 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 OR14C36Q8NHC7 312 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 MYLIPQ8WY64 445 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 FATE1Q969F0 183 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 GJA10Q969M2 543 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 TSPAN17Q96FV3 270 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 TOE1Q96GM8 510 aaKnown RBP6.88□□□□□ -1.31
TUBD1-208ENST00000588009 AMNQ9BXJ7 453 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 NAA15Q9BXJ9 866 aaKnown RBP6.88□□□□□ -1.31
TUBD1-208ENST00000588009 TMEM60Q9H2L4 133 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 KLHL11Q9NVR0 708 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 CDY2AQ9Y6F7 541 aa6.88□□□□□ -1.31
TUBD1-208ENST00000588009 CCDC154A6NI56 674 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 HTRA2O43464 458 aaPredicted RBP6.87□□□□□ -1.31
TUBD1-208ENST00000588009 UBXN7O94888 489 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 PCDH8O95206 1070 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 CELA3BP08861 270 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 SLC5A1P13866 664 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 RAC2P15153 192 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 EDNRBP24530 442 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 THBS2P35442 1172 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 ERVFRD-1P60508 538 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 CCT2P78371 535 aaKnown RBP6.87□□□□□ -1.31
TUBD1-208ENST00000588009 PPARAQ07869 468 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 NOLC1Q14978 699 aaKnown RBP eCLIP6.87□□□□□ -1.31
TUBD1-208ENST00000588009 ZRSR2Q15696 482 aaKnown RBP6.87□□□□□ -1.31
TUBD1-208ENST00000588009 PGS1Q32NB8 556 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 CCDC149Q6ZUS6 474 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 TOGARAM2Q6ZUX3 1019 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 FAM126BQ8IXS8 530 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 FLCNQ8NFG4 579 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 CALML6Q8TD86 181 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 PARD3BQ8TEW8 1205 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 RPGRQ92834 1020 aaKnown RBP6.87□□□□□ -1.31
TUBD1-208ENST00000588009 SLC39A2Q9NP94 309 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 PAK6Q9NQU5 681 aaPredicted RBP6.87□□□□□ -1.31
TUBD1-208ENST00000588009 PUF60Q9UHX1 559 aaKnown RBP6.87□□□□□ -1.31
TUBD1-208ENST00000588009 USP18Q9UMW8 372 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 LIMCH1Q9UPQ0 1083 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 IPPQ9Y573 584 aa6.87□□□□□ -1.31
TUBD1-208ENST00000588009 B3GALT2O43825 422 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 MED26O95402 600 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 MPOP05164 745 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 MYL3P08590 195 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 ENO2P09104 434 aaPredicted RBP6.86□□□□□ -1.31
TUBD1-208ENST00000588009 WASP42768 502 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 AK2P54819 239 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 PRR5P85299 388 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 MALLQ13021 153 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 ADRM1Q16186 407 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 TEPPQ6URK8 271 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 LRSAM1Q6UWE0 723 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 NFXL1Q6ZNB6 911 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 MIB1Q86YT6 1006 aa6.86□□□□□ -1.31
TUBD1-208ENST00000588009 KIAA0319LQ8IZA0 1049 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms