RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 ATP6V0A4Q9HBG4 840 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 ERVK-5Q9HDB9 667 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 KIAA1024Q9UPX6 916 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 DNM3Q9UQ16 869 aa16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 YBX2Q9Y2T7 364 aaKnown RBP16.17■□□□□ 0.18
SMARCA4-212ENST00000586985 A0A087WZ62 844 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 ARHGEF35A5YM69 484 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 SRGAP2CP0DJJ0 459 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 DARSP14868 501 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 MYOGP15173 224 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 ZSCAN20P17040 1043 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 CDC25AP30304 524 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 ZRSR1Q15695 479 aaKnown RBP16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 FAM173BQ6P4H8 233 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 POTEGQ6S5H5 508 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 RTN4RL1Q86UN2 441 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 ZNF410Q86VK4 478 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 KSR1Q8IVT5 923 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 NLRP4Q96MN2 994 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 FDXACB1Q9BRP7 624 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 RNF216Q9NWF9 866 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 COL4A3BPQ9Y5P4 624 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 CLIC4Q9Y696 253 aa16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 TRIP12Q14669 1992 aaPredicted RBP16.16■□□□□ 0.18
SMARCA4-212ENST00000586985 DENND3A2RUS2 1198 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 PP2D1A8MPX8 630 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 UBA7P41226 1012 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 CEBPZQ03701 1054 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 MXD4Q14582 209 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 PPP2R2DQ66LE6 453 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 PADI6Q6TGC4 694 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 FAM228AQ86W67 206 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 CDK5RAP3Q96JB5 506 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 AK8Q96MA6 479 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 ZNF396Q96N95 335 aaPredicted RBP16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 DDX19AQ9NUU7 478 aaKnown RBP16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 MTMR10Q9NXD2 777 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 INSL6Q9Y581 213 aa16.15■□□□□ 0.18
SMARCA4-212ENST00000586985 KAT6AQ92794 2004 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 USO1O60763 962 aaKnown RBP16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 CA3P07451 260 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 STAG3L1P0CL83 205 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 LAMTOR4Q0VGL1 99 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 TFDP1Q14186 410 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 ECM1Q16610 540 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 FOXD4L5Q5VV16 416 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 MAEAQ7L5Y9 396 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 KCTD17Q8N5Z5 321 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 MCPH1Q8NEM0 835 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 FOXD4L4Q8WXT5 416 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 ADAM2Q99965 735 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 TSPYL2Q9H2G4 693 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 BHMT2Q9H2M3 363 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 TTYH1Q9H313 450 aaPredicted RBP16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 TMX1Q9H3N1 280 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 XPNPEP1Q9NQW7 623 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 C1orf112Q9NSG2 853 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 LRFN2Q9ULH4 789 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 DNAH12Q6ZR08 3092 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 SCN5AQ14524 2016 aa16.14■□□□□ 0.17
SMARCA4-212ENST00000586985 CSDE1O75534 798 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 ZSCAN22P10073 491 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 IBSPP21815 317 aaPredicted RBP16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 SFPQP23246 707 aaKnown RBP eCLIP16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 ARL2P36404 184 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 LONP1P36776 959 aaKnown RBP16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 FAM102BQ5T8I3 360 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 SLC24A5Q71RS6 500 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 SRGAP1Q7Z6B7 1085 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 CABP7Q86V35 215 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 RNF149Q8NC42 400 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 CALML4Q96GE6 196 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 YME1L1Q96TA2 773 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 NT5C3AQ9H0P0 336 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 RGS18Q9NS28 235 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 PCDHB7Q9Y5E2 793 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 TANC1Q9C0D5 1861 aa16.13■□□□□ 0.17
SMARCA4-212ENST00000586985 E9PMD0 336 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 SLC26A4O43511 780 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 EYA4O95677 639 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 CYP11B2P19099 503 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 FGFR4P22455 802 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 MARCKSP29966 332 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 PHKA2P46019 1235 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 GRIN2CQ14957 1233 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 PTPAQ15257 358 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 CATSPER4Q7RTX7 472 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 RASSF8Q8NHQ8 419 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 USP28Q96RU2 1077 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 MMTAG2Q9BU76 263 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 POLR3FQ9H1D9 316 aaPredicted RBP16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 IFT122Q9HBG6 1241 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 CHST12Q9NRB3 414 aa16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 TFIP11Q9UBB9 837 aaKnown RBP16.12■□□□□ 0.17
SMARCA4-212ENST00000586985 SARSP49591 514 aaKnown RBP16.11■□□□□ 0.17
SMARCA4-212ENST00000586985 HTRA4P83105 476 aaPredicted RBP16.11■□□□□ 0.17
SMARCA4-212ENST00000586985 TAP1Q03518 808 aa16.11■□□□□ 0.17
SMARCA4-212ENST00000586985 POU5F1BQ06416 359 aa16.11■□□□□ 0.17
SMARCA4-212ENST00000586985 NCBP1Q09161 790 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms