RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 USP25Q9UHP3 1055 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 TRPC6Q9Y210 931 aa17.95■□□□□ 0.46
ATG4D-205ENST00000586477 MAFBQ9Y5Q3 323 aaPredicted RBP17.95■□□□□ 0.46
ATG4D-205ENST00000586477 COL4A4P53420 1690 aaPredicted RBP17.95■□□□□ 0.46
ATG4D-205ENST00000586477 PRRC2BQ5JSZ5 2229 aaKnown RBP17.95■□□□□ 0.46
ATG4D-205ENST00000586477 POTEB3A0JP26 581 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 RFXAPO00287 272 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 PRPF40AO75400 957 aaKnown RBP17.94■□□□□ 0.46
ATG4D-205ENST00000586477 LPIN1Q14693 890 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 POTEBQ6S5H4 581 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 SHC4Q6S5L8 630 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 TPH2Q8IWU9 490 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 CKAP2LQ8IYA6 745 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 ATP8B4Q8TF62 1192 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 CCDC43Q96MW1 224 aaKnown RBP17.94■□□□□ 0.46
ATG4D-205ENST00000586477 NACC1Q96RE7 527 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 CUEDC2Q9H467 287 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 CERS4Q9HA82 394 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 NRBP2Q9NSY0 501 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 STK17AQ9UEE5 414 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 PPME1Q9Y570 386 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 PCDHA2Q9Y5H9 948 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 CDY2AQ9Y6F7 541 aa17.94■□□□□ 0.46
ATG4D-205ENST00000586477 FAM237AA0A1B0GTK4 181 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 TLL1O43897 1013 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 SLITRK3O94933 977 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 GHRP10912 638 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 CYP4A11Q02928 519 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 GRIN1Q05586 938 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 XKR3Q5GH77 459 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 FBXO47Q5MNV8 452 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 RRAGBQ5VZM2 374 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 MTHFD1LQ6UB35 978 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 CATSPER3Q86XQ3 398 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 EXOC8Q8IYI6 725 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 FSIP1Q8NA03 581 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 IQUBQ8NA54 791 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 BANK1Q8NDB2 785 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 BBXQ8WY36 941 aaPredicted RBP17.93■□□□□ 0.46
ATG4D-205ENST00000586477 PPM1EQ8WY54 764 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 SEPT8Q92599 483 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 DYDC2Q96IM9 177 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 EPSTI1Q96J88 318 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 FAM49AQ9H0Q0 323 aaPredicted RBP17.93■□□□□ 0.46
ATG4D-205ENST00000586477 MAGEF1Q9HAY2 307 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 KCNH3Q9ULD8 1083 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 DNM3Q9UQ16 869 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 COL4A6Q14031 1691 aa17.93■□□□□ 0.46
ATG4D-205ENST00000586477 PP2D1A8MPX8 630 aa17.92■□□□□ 0.46
ATG4D-205ENST00000586477 ZNF862O60290 1169 aa17.92■□□□□ 0.46
ATG4D-205ENST00000586477 HBP1O60381 514 aa17.92■□□□□ 0.46
ATG4D-205ENST00000586477 EFCAB14O75071 495 aa17.92■□□□□ 0.46
ATG4D-205ENST00000586477 IGFBP4P22692 258 aa17.92■□□□□ 0.46
ATG4D-205ENST00000586477 MRPS6P82932 125 aaKnown RBP17.92■□□□□ 0.46
ATG4D-205ENST00000586477 ZRSR1Q15695 479 aaKnown RBP17.92■□□□□ 0.46
ATG4D-205ENST00000586477 UGCGQ16739 394 aa17.92■□□□□ 0.46
ATG4D-205ENST00000586477 FAM117BQ6P1L5 589 aa17.92■□□□□ 0.46
ATG4D-205ENST00000586477 IFIH1Q9BYX4 1025 aaKnown RBP17.92■□□□□ 0.46
ATG4D-205ENST00000586477 AGO3Q9H9G7 860 aaKnown RBP17.92■□□□□ 0.46
ATG4D-205ENST00000586477 RGL1Q9NZL6 768 aa17.92■□□□□ 0.46
ATG4D-205ENST00000586477 TTC3P53804 2025 aa17.92■□□□□ 0.46
ATG4D-205ENST00000586477 MED24O75448 989 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 MBD3O95983 291 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 OATP04181 439 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 SPATA31C1P0DKV0 1188 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 PFKFB1P16118 471 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 KLRC1P26715 233 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 CDC25AP30304 524 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 MCM4P33991 863 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 STAT6P42226 847 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 SYKP43405 635 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 HTRA4P83105 476 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-205ENST00000586477 PRKCEQ02156 737 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 FAM160A1Q05DH4 1040 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 TMEM62Q0P6H9 643 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 CTTNQ14247 550 aaKnown RBP17.91■□□□□ 0.46
ATG4D-205ENST00000586477 SPECC1Q5M775 1068 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 LINC01599Q8WXQ3 324 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 RAD9AQ99638 391 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 MMTAG2Q9BU76 263 aaKnown RBP17.91■□□□□ 0.46
ATG4D-205ENST00000586477 LRRC27Q9C0I9 530 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 PRDM6Q9NQX0 595 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 ANKEF1Q9NU02 776 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 DDX19AQ9NUU7 478 aaKnown RBP17.91■□□□□ 0.46
ATG4D-205ENST00000586477 HOOK1Q9UJC3 728 aaKnown RBP17.91■□□□□ 0.46
ATG4D-205ENST00000586477 KIAA1024Q9UPX6 916 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 XIRP2A4UGR9 3374 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 TTC28Q96AY4 2481 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 COL1A2P08123 1366 aa17.91■□□□□ 0.46
ATG4D-205ENST00000586477 SMIM35A0A1B0GVV1 85 aa17.9■□□□□ 0.46
ATG4D-205ENST00000586477 LINC01553A4QN01 128 aa17.9■□□□□ 0.46
ATG4D-205ENST00000586477 LPXNO60711 386 aa17.9■□□□□ 0.46
ATG4D-205ENST00000586477 C22orf31O95567 290 aa17.9■□□□□ 0.46
ATG4D-205ENST00000586477 YWHABP31946 246 aaKnown RBP17.9■□□□□ 0.46
ATG4D-205ENST00000586477 KARSQ15046 597 aaKnown RBP17.9■□□□□ 0.46
ATG4D-205ENST00000586477 TMEM119Q4V9L6 283 aa17.9■□□□□ 0.46
ATG4D-205ENST00000586477 KANK3Q6NY19 840 aa17.9■□□□□ 0.46
ATG4D-205ENST00000586477 CEP57L1Q8IYX8 460 aa17.9■□□□□ 0.46
ATG4D-205ENST00000586477 KIAA0319LQ8IZA0 1049 aa17.9■□□□□ 0.46
ATG4D-205ENST00000586477 MYOCDQ8IZQ8 938 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms