RNA–Protein interactions for RNA: ENST00000585941.5

LIG3-205, Transcript of DNA ligase 3, humanhuman

TSL 1 (best)

Gene LIG3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-205ENST00000585941 FBXL5Q9UKA1 691 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 MYO6Q9UM54 1294 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 CLEC11AQ9Y240 323 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 SLC45A1Q9Y2W3 748 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 UTRNP46939 3433 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 SSU72P8A0A1W2PR75 194 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 EPHB6O15197 1021 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 MAPK13O15264 365 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 ZNF862O60290 1169 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 STBD1O95210 358 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 SLU7O95391 586 aaKnown RBP15.54■□□□□ 0.08
LIG3-205ENST00000585941 CASP4P49662 377 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 NPEPPSP55786 919 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 PRKCEQ02156 737 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 DMP1Q13316 513 aaPredicted RBP15.54■□□□□ 0.08
LIG3-205ENST00000585941 SPA17Q15506 151 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 EXOC3L4Q17RC7 722 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 DCAF17Q5H9S7 520 aaPredicted RBP15.54■□□□□ 0.08
LIG3-205ENST00000585941 FAM102BQ5T8I3 360 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 TCERG1LQ5VWI1 586 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 PLA2G4FQ68DD2 849 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 MAEAQ7L5Y9 396 aa15.54■□□□□ 0.08
LIG3-205ENST00000585941 NTPCRQ9BSD7 190 aaKnown RBP15.54■□□□□ 0.08
LIG3-205ENST00000585941 LRRC37A2A6NM11 1700 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 LRRC53A6NM62 1247 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 NOL4O94818 638 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 CETPP11597 493 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 PEX3P56589 373 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 SLC9C1Q4G0N8 1177 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 SFMBT2Q5VUG0 894 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 SEPT14Q6ZU15 432 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 CYFIP1Q7L576 1253 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 CCDC60Q8IWA6 550 aaPredicted RBP15.53■□□□□ 0.08
LIG3-205ENST00000585941 CCDC155Q8N6L0 562 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 ERO1AQ96HE7 468 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 MMP19Q99542 508 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 TSGA10Q9BZW7 698 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 ATP6V0A4Q9HBG4 840 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 ZNF302Q9NR11 478 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 CYP26B1Q9NR63 512 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 SEPT9Q9UHD8 586 aaPredicted RBP15.53■□□□□ 0.08
LIG3-205ENST00000585941 PPME1Q9Y570 386 aa15.53■□□□□ 0.08
LIG3-205ENST00000585941 MAFBQ9Y5Q3 323 aaPredicted RBP15.53■□□□□ 0.08
LIG3-205ENST00000585941 ZNFX1Q9P2E3 1918 aaKnown RBP15.52■□□□□ 0.08
LIG3-205ENST00000585941 SYNGAP1Q96PV0 1343 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 DNAJC25-GNG10A0A024R161 153 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 IGKV6D-21A0A0A0MT36 114 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 KRT86O43790 486 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 EXOC3O60645 756 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 LCA5LO95447 670 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 SERPING1P05155 500 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 CYP2J2P51589 502 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 POLR2FP61218 127 aaKnown RBP15.52■□□□□ 0.08
LIG3-205ENST00000585941 CCNA1P78396 465 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 SP2Q02086 613 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 MAPK8IP2Q13387 824 aaPredicted RBP15.52■□□□□ 0.08
LIG3-205ENST00000585941 FAM160B1Q5W0V3 765 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 KIAA1328Q86T90 577 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 FMNL3Q8IVF7 1028 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 CRACR2AQ9BSW2 395 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 GANQ9H2C0 597 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 DEF6Q9H4E7 631 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 PDLIM7Q9NR12 457 aa15.52■□□□□ 0.08
LIG3-205ENST00000585941 REXO2Q9Y3B8 237 aaKnown RBP15.52■□□□□ 0.08
LIG3-205ENST00000585941 TMEM150BA6NC51 233 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 URI1O94763 535 aaPredicted RBP15.51■□□□□ 0.07
LIG3-205ENST00000585941 KRT13P13646 458 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 UBA1P22314 1058 aaKnown RBP15.51■□□□□ 0.07
LIG3-205ENST00000585941 ARHGAP25P42331 645 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 GTF2A2P52657 109 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 ERVK-9P63128 1117 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 METTL7BQ6UX53 244 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 INTS8Q75QN2 995 aaKnown RBP15.51■□□□□ 0.07
LIG3-205ENST00000585941 KSR1Q8IVT5 923 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 IFT74Q96LB3 600 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 WDR24Q96S15 920 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 TXNRD2Q9NNW7 524 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 LUC7LQ9NQ29 371 aaKnown RBP15.51■□□□□ 0.07
LIG3-205ENST00000585941 KMT5AQ9NQR1 393 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 AIPL1Q9NZN9 384 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 ARHGAP20Q9P2F6 1191 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 BZW2Q9Y6E2 419 aaKnown RBP15.51■□□□□ 0.07
LIG3-205ENST00000585941 CCDC169A6NNP5 214 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 SLC16A4O15374 487 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 N4BP1O75113 896 aaKnown RBP15.51■□□□□ 0.07
LIG3-205ENST00000585941 FARP2O94887 1054 aaPredicted RBP15.51■□□□□ 0.07
LIG3-205ENST00000585941 OATP04181 439 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 PON1P27169 355 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 GJA5P36382 358 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 NPTX2P47972 431 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 SP4Q02446 784 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 BFSP1Q12934 665 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 ZNF569Q5MCW4 686 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 KLHDC7AQ5VTJ3 777 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 MAP4K3Q8IVH8 894 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 XXYLT1Q8NBI6 393 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 TMEM161BQ8NDZ6 487 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 MORC4Q8TE76 937 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 AFAP1L1Q8TED9 768 aa15.51■□□□□ 0.07
LIG3-205ENST00000585941 KCNN1Q92952 543 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms