RNA–Protein interactions for RNA: ENST00000585876.1

LRFN3-202, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 558 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-202ENST00000585876 PHOSPHO2Q8TCD6 241 aa12.93□□□□□ -0.34
LRFN3-202ENST00000585876 PSPC1Q8WXF1 523 aaKnown RBP12.93□□□□□ -0.34
LRFN3-202ENST00000585876 CCDC43Q96MW1 224 aaKnown RBP12.93□□□□□ -0.34
LRFN3-202ENST00000585876 PNMA5Q96PV4 448 aa12.93□□□□□ -0.34
LRFN3-202ENST00000585876 SLC9A7Q96T83 725 aa12.93□□□□□ -0.34
LRFN3-202ENST00000585876 AGO3Q9H9G7 860 aaKnown RBP12.93□□□□□ -0.34
LRFN3-202ENST00000585876 CDHR5Q9HBB8 845 aa12.93□□□□□ -0.34
LRFN3-202ENST00000585876 SUCLA2Q9P2R7 463 aaPredicted RBP12.93□□□□□ -0.34
LRFN3-202ENST00000585876 KIAA1024Q9UPX6 916 aa12.93□□□□□ -0.34
LRFN3-202ENST00000585876 COL4A3BPQ9Y5P4 624 aa12.93□□□□□ -0.34
LRFN3-202ENST00000585876 KIAA1671Q9BY89 1806 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 SPTLC2O15270 562 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 ASAP2O43150 1006 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 DARSP14868 501 aaKnown RBP12.92□□□□□ -0.34
LRFN3-202ENST00000585876 CYP11B2P19099 503 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 EIF4BP23588 611 aaKnown RBP12.92□□□□□ -0.34
LRFN3-202ENST00000585876 ARL2P36404 184 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 WDR5P61964 334 aaKnown RBP12.92□□□□□ -0.34
LRFN3-202ENST00000585876 POU5F1BQ06416 359 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 MXD4Q14582 209 aaPredicted RBP12.92□□□□□ -0.34
LRFN3-202ENST00000585876 GPR153Q6NV75 609 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 PADI6Q6TGC4 694 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 KCNK18Q7Z418 384 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 CABP7Q86V35 215 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 IFNLR1Q8IU57 520 aaPredicted RBP12.92□□□□□ -0.34
LRFN3-202ENST00000585876 KRI1Q8N9T8 703 aaKnown RBP12.92□□□□□ -0.34
LRFN3-202ENST00000585876 KCNG4Q8TDN1 519 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 PRPF31Q8WWY3 499 aaKnown RBP12.92□□□□□ -0.34
LRFN3-202ENST00000585876 OSMRQ99650 979 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 FTHL17Q9BXU8 183 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 NFKBIZQ9BYH8 718 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 CSRNP2Q9H175 543 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 BHMT2Q9H2M3 363 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 ERVK-5Q9HDB9 667 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 CFAP45Q9UL16 551 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 PADI3Q9ULW8 664 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 DNM3Q9UQ16 869 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 RBM19Q9Y4C8 960 aaKnown RBP12.92□□□□□ -0.34
LRFN3-202ENST00000585876 SLC4A7Q9Y6M7 1214 aa12.92□□□□□ -0.34
LRFN3-202ENST00000585876 REV3LO60673 3130 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 ARHGEF35A5YM69 484 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 MARCKSP29966 332 aaPredicted RBP12.91□□□□□ -0.34
LRFN3-202ENST00000585876 CD52P31358 61 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 UBA7P41226 1012 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.34
LRFN3-202ENST00000585876 CEBPZQ03701 1054 aaKnown RBP12.91□□□□□ -0.34
LRFN3-202ENST00000585876 LAMTOR4Q0VGL1 99 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 PAK2Q13177 524 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 STK38Q15208 465 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 ODR4Q5SWX8 454 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 FOXD4L5Q5VV16 416 aaPredicted RBP12.91□□□□□ -0.34
LRFN3-202ENST00000585876 FAM228AQ86W67 206 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 FOXD4L4Q8WXT5 416 aaPredicted RBP12.91□□□□□ -0.34
LRFN3-202ENST00000585876 TMEM143Q96AN5 459 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 IFT122Q9HBG6 1241 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 KCND2Q9NZV8 630 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 NOC2LQ9Y3T9 749 aaKnown RBP12.91□□□□□ -0.34
LRFN3-202ENST00000585876 ATP6V1DQ9Y5K8 247 aa12.91□□□□□ -0.34
LRFN3-202ENST00000585876 MYO9BQ13459 2157 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 E9PMD0 336 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 SOX1O00570 391 aaPredicted RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 GPR182O15218 404 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 USO1O60763 962 aaKnown RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 RPS6KA5O75582 802 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 ATP2A2P16615 1042 aaKnown RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 KCNJ6P48051 423 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 NUCB2P80303 420 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 DNM1Q05193 864 aaKnown RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 PCBP1Q15365 356 aaKnown RBP eCLIP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 AXDND1Q5T1B0 1012 aaPredicted RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 FAM109BQ6ICB4 259 aaPredicted RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 USP49Q70CQ1 688 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 RHPN2Q8IUC4 686 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 CRIPAKQ8N1N5 446 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 SYT2Q8N9I0 419 aaPredicted RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 LRRC15Q8TF66 581 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 NLRP7Q8WX94 980 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 LINC01599Q8WXQ3 324 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 SYMPKQ92797 1274 aaKnown RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 CALML4Q96GE6 196 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 TIPINQ9BVW5 301 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 GCOM2Q9BZD3 368 aaPredicted RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 TSPYL2Q9H2G4 693 aaPredicted RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 TMX1Q9H3N1 280 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 TFIP11Q9UBB9 837 aaKnown RBP12.9□□□□□ -0.34
LRFN3-202ENST00000585876 RCOR1Q9UKL0 485 aa12.9□□□□□ -0.34
LRFN3-202ENST00000585876 TMEM265A0A087WTH1 108 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 A0A087WWV3 80 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 A0A087WZ62 844 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 ZBBXA8MT70 800 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 CUTAO60888 179 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 PLCG1P19174 1290 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 GLRA2P23416 452 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 GUCY2CP25092 1073 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 ANP32AP39687 249 aaKnown RBP12.89□□□□□ -0.35
LRFN3-202ENST00000585876 SLC12A3P55017 1021 aa12.89□□□□□ -0.35
LRFN3-202ENST00000585876 DEFB103AP81534 67 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms