RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PCDHB13Q9Y5F0 798 aa11.46□□□□□ -0.57
LIG3-203ENST00000585370 A0A0G2JMZ2 1700 aa11.46□□□□□ -0.58
LIG3-203ENST00000585370 ASB14A6NK59 587 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 AKR1B15C9JRZ8 316 aaPredicted RBP11.45□□□□□ -0.58
LIG3-203ENST00000585370 CETN3O15182 167 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 TEX33O43247 280 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 STX10O60499 249 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 MSCO60682 206 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 RGS20O76081 388 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 TUBB4AP04350 444 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 CYBAP13498 195 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 SCP2P22307 547 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 YWHABP31946 246 aaKnown RBP11.45□□□□□ -0.58
LIG3-203ENST00000585370 ABCD1P33897 745 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
LIG3-203ENST00000585370 SNRPFP62306 86 aaKnown RBP11.45□□□□□ -0.58
LIG3-203ENST00000585370 PPP2R3AQ06190 1150 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 ZCWPW2Q504Y3 356 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 PRAMEF19Q5SWL8 479 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 FKBP15Q5T1M5 1219 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 GPR153Q6NV75 609 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 ARMCX5Q6P1M9 558 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 SFR1Q86XK3 245 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 CREBRFQ8IUR6 639 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 CNGA4Q8IV77 575 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 ZC3H3Q8IXZ2 948 aaKnown RBP11.45□□□□□ -0.58
LIG3-203ENST00000585370 ABRAQ8N0Z2 381 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 GOLGA5Q8TBA6 731 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 HPS3Q969F9 1004 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 CNOT6LQ96LI5 555 aaKnown RBP11.45□□□□□ -0.58
LIG3-203ENST00000585370 DRC1Q96MC2 740 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 NOC4LQ9BVI4 516 aaKnown RBP11.45□□□□□ -0.58
LIG3-203ENST00000585370 VPS16Q9H269 839 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 KCTD10Q9H3F6 313 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 TMX1Q9H3N1 280 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 TAB2Q9NYJ8 693 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 PKD2L1Q9P0L9 805 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 CGNQ9P2M7 1197 aaKnown RBP11.45□□□□□ -0.58
LIG3-203ENST00000585370 FAM184BQ9ULE4 1060 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 CUL9Q8IWT3 2517 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 LOXHD1Q8IVV2 1947 aa11.45□□□□□ -0.58
LIG3-203ENST00000585370 FRMPD3Q5JV73 1810 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 DNAJC25-GNG10A0A024R161 153 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 SOWAHBA6NEL2 793 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 DNM1LO00429 736 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 ATG7O95352 703 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 CCNE2O96020 404 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 RARRES1P49788 294 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 ATN1P54259 1190 aaPredicted RBP11.44□□□□□ -0.58
LIG3-203ENST00000585370 CCZ1BP86790 482 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 CCZ1P86791 482 aaPredicted RBP11.44□□□□□ -0.58
LIG3-203ENST00000585370 CNTN2Q02246 1040 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 TBC1D8BQ0IIM8 1120 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 MYBPC2Q14324 1141 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 LRRC41Q15345 812 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 MAN2A1Q16706 1144 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 GJC2Q5T442 439 aaPredicted RBP11.44□□□□□ -0.58
LIG3-203ENST00000585370 ABHD15Q6UXT9 468 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.44□□□□□ -0.58
LIG3-203ENST00000585370 Q7L0L9 218 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 ZNF720Q7Z2F6 126 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 FAM178BQ8IXR5 827 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 MORC4Q8TE76 937 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 ST6GALNAC4Q9H4F1 302 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 C17orf75Q9HAS0 396 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 TYW1Q9NV66 732 aaKnown RBP11.44□□□□□ -0.58
LIG3-203ENST00000585370 TBC1D7Q9P0N9 293 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 WRAP73Q9P2S5 460 aaPredicted RBP11.44□□□□□ -0.58
LIG3-203ENST00000585370 PPME1Q9Y570 386 aa11.44□□□□□ -0.58
LIG3-203ENST00000585370 ARHGAP6O43182 974 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 SEPT4O43236 478 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 OFD1O75665 1012 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 GCNT3O95395 438 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 SUPT20HL2P0C7V6 817 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 ACTR2P61160 394 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 RAD51AP2Q09MP3 1159 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 LRMPQ12912 555 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 ADAM9Q13443 819 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 TSR1Q2NL82 804 aaKnown RBP11.43□□□□□ -0.58
LIG3-203ENST00000585370 VWA3BQ502W6 1294 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 XKR9Q5GH70 373 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 XKR3Q5GH77 459 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 FIGNQ5HY92 759 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 ODR4Q5SWX8 454 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 LRRC55Q6ZSA7 311 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 FRMD5Q7Z6J6 570 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 DEFB123Q8N688 67 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 MAML3Q96JK9 1138 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 ERGIC2Q96RQ1 377 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 TMEM206Q9H813 350 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 METTL14Q9HCE5 456 aaKnown RBP11.43□□□□□ -0.58
LIG3-203ENST00000585370 GABBR1Q9UBS5 961 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 PYCARDQ9ULZ3 195 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 PRUNE2Q8WUY3 3088 aa11.43□□□□□ -0.58
LIG3-203ENST00000585370 ZNFX1Q9P2E3 1918 aaKnown RBP11.43□□□□□ -0.58
LIG3-203ENST00000585370 H0YCG3 227 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 KIF2AO00139 706 aaPredicted RBP11.42□□□□□ -0.58
LIG3-203ENST00000585370 PES1O00541 588 aaKnown RBP11.42□□□□□ -0.58
LIG3-203ENST00000585370 ZBTB39O15060 712 aa11.42□□□□□ -0.58
LIG3-203ENST00000585370 SLC16A3O15427 465 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms