RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 RINT1Q6NUQ1 792 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 MAEAQ7L5Y9 396 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 SH3RF1Q7Z6J0 888 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 RHPN2Q8IUC4 686 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 LINC01465Q8N7H1 131 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 TMEM143Q96AN5 459 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 TRIM43Q96BQ3 446 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 IFT74Q96LB3 600 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 RUSC1Q9BVN2 902 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 POLR3FQ9H1D9 316 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 TNMDQ9H2S6 317 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 XPNPEP1Q9NQW7 623 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 ZMYND8Q9ULU4 1186 aaPredicted RBP16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 COL4A3BPQ9Y5P4 624 aa16.18■□□□□ 0.18
SCAMP4-209ENST00000585335 TBCAO75347 108 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 PRPF40AO75400 957 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 SLFN14P0C7P3 912 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 CYP2C18P33260 490 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 NDUFA8P51970 172 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 FAM160A1Q05DH4 1040 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 E2F4Q16254 413 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 NAALADL2Q58DX5 795 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 FAM26DQ5JW98 314 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 ZNF618Q5T7W0 954 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 C1orf186Q6ZWK4 172 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 ZNF410Q86VK4 478 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 PRPF31Q8WWY3 499 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 NLRP7Q8WX94 980 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 WNT8BQ93098 351 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 CELF4Q9BZC1 486 aaKnown RBP16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 KCNG1Q9UIX4 513 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 ODF2LQ9ULJ1 636 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 CDY2AQ9Y6F7 541 aa16.17■□□□□ 0.18
SCAMP4-209ENST00000585335 IQCF3P0C7M6 154 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 SYN1P17600 705 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 CRYBB1P53674 252 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 CCL23P55773 120 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 NLRP11P59045 1033 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 TMEM62Q0P6H9 643 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 LAMTOR4Q0VGL1 99 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 ODR4Q5SWX8 454 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 MFSD5Q6N075 450 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 KANK3Q6NY19 840 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 USP38Q8NB14 1042 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 CNNM3Q8NE01 707 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 NLRP4Q96MN2 994 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 GCOM2Q9BZD3 368 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 INO80BQ9C086 356 aaPredicted RBP16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 GOLPH3LQ9H4A5 285 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 C17orf75Q9HAS0 396 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 HOOK1Q9UJC3 728 aaKnown RBP16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 GINS2Q9Y248 185 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 DNAH12Q6ZR08 3092 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 EVPLQ92817 2033 aa16.16■□□□□ 0.18
SCAMP4-209ENST00000585335 KINO60870 393 aaKnown RBP16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 HIP1RO75146 1068 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 FAM13AO94988 1023 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 ZNF202O95125 648 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 ARL2P36404 184 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 PHKA2P46019 1235 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 GPC3P51654 580 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 FPGSQ05932 587 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 RAD51AP2Q09MP3 1159 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 PPIGQ13427 754 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 DRP2Q13474 957 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 KIZQ2M2Z5 673 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 RPUSD2Q8IZ73 545 aaKnown RBP16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 LRRC15Q8TF66 581 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 PPP1R16BQ96T49 567 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 WNT8AQ9H1J5 351 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 GPRC5CQ9NQ84 441 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 KBTBD4Q9NVX7 518 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 SERTAD1Q9UHV2 236 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 SQORQ9Y6N5 450 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 UMODL1Q5DID0 1318 aa16.15■□□□□ 0.18
SCAMP4-209ENST00000585335 LRRIQ4A6NIV6 560 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 ACTN4O43707 911 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 CHRNA1P02708 482 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 MYL1P05976 194 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 PFKMP08237 780 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 SRGAP2CP0DJJ0 459 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 NAMPTP43490 491 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 MGAT3Q09327 533 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 DMP1Q13316 513 aaPredicted RBP16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 ZBTB8OSQ8IWT0 167 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 RNF149Q8NC42 400 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 DEPTORQ8TB45 409 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 DDX12PQ92771 950 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 REEP2Q9BRK0 252 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 C2orf40Q9H1Z8 148 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 ZHX3Q9H4I2 956 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 LARSQ9P2J5 1176 aaKnown RBP16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 TANC1Q9C0D5 1861 aa16.14■□□□□ 0.17
SCAMP4-209ENST00000585335 H0YCG3 227 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 GADD45BO75293 160 aaPredicted RBP16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 GPR32O75388 356 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 GAP43P17677 238 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 GLRA2P23416 452 aa16.13■□□□□ 0.17
SCAMP4-209ENST00000585335 SMTNP53814 917 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms