RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 GAS2L3Q86XJ1 694 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 ADSSL1Q8N142 457 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 MYCT1Q8N699 235 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 ARRDC4Q8NCT1 418 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 LMBR1Q8WVP7 490 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 SPIRE2Q8WWL2 714 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 TCP11Q8WWU5 503 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 HPS3Q969F9 1004 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 STRA6Q9BX79 667 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 POLR3FQ9H1D9 316 aaPredicted RBP17.85■□□□□ 0.45
SS18-226ENST00000585241 DNAJC25Q9H1X3 360 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 ST6GALNAC4Q9H4F1 302 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 OGDHLQ9ULD0 1010 aa17.85■□□□□ 0.45
SS18-226ENST00000585241 KAT6AQ92794 2004 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 SFI1A8K8P3 1242 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 PPP1R37O75864 691 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 CD44P16070 742 aaKnown RBP17.84■□□□□ 0.45
SS18-226ENST00000585241 KLRC1P26715 233 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 ERCC5P28715 1186 aaPredicted RBP17.84■□□□□ 0.45
SS18-226ENST00000585241 ACLYP53396 1101 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 NCKAP1LP55160 1127 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 BMT2Q1RMZ1 405 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 ODR4Q5SWX8 454 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 MAEAQ7L5Y9 396 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 SMYD4Q8IYR2 804 aaPredicted RBP17.84■□□□□ 0.45
SS18-226ENST00000585241 GUF1Q8N442 669 aaKnown RBP17.84■□□□□ 0.45
SS18-226ENST00000585241 RETREG2Q8NC44 543 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 SLC17A8Q8NDX2 589 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 BSNDQ8WZ55 320 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 NTPCRQ9BSD7 190 aaKnown RBP17.84■□□□□ 0.45
SS18-226ENST00000585241 FGFBP2Q9BYJ0 223 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 CRISPLD2Q9H0B8 497 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 POLD4Q9HCU8 107 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 SLC39A2Q9NP94 309 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 KCNG1Q9UIX4 513 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 PHF24Q9UPV7 400 aa17.84■□□□□ 0.45
SS18-226ENST00000585241 UBE4BO95155 1302 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 EIF3DO15371 548 aaKnown RBP eCLIP17.83■□□□□ 0.44
SS18-226ENST00000585241 GLRA2P23416 452 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 PRCPP42785 496 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 SOX10P56693 466 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 IGBP1P78318 339 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 DRP2Q13474 957 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 ALCAMQ13740 583 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 NFRKBQ6P4R8 1299 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 FOXR2Q6PJQ5 311 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 ZNF720Q7Z2F6 126 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 FAM178BQ8IXR5 827 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 FAM200AQ8TCP9 573 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 TMEM143Q96AN5 459 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 NAT10Q9H0A0 1025 aaKnown RBP17.83■□□□□ 0.44
SS18-226ENST00000585241 RNF208Q9H0X6 261 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 ZHX3Q9H4I2 956 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 SETD4Q9NVD3 440 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 HDAC6Q9UBN7 1215 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 GTF2IRD1Q9UHL9 959 aa17.83■□□□□ 0.44
SS18-226ENST00000585241 GRIN2DO15399 1336 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 C17orf102A2RUQ5 167 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 DNM1LO00429 736 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 GNAT1P11488 350 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 SCP2P22307 547 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 NAMPTP43490 491 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 NPTX2P47972 431 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 ZNF165P49910 485 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 CASP5P51878 434 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 PEX3P56589 373 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 PTPN11Q06124 597 aaPredicted RBP17.82■□□□□ 0.44
SS18-226ENST00000585241 DMP1Q13316 513 aaPredicted RBP17.82■□□□□ 0.44
SS18-226ENST00000585241 HIC1Q14526 733 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 MXD4Q14582 209 aaPredicted RBP17.82■□□□□ 0.44
SS18-226ENST00000585241 PPP2R5AQ15172 486 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 NBPF20Q3BBV1 942 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 EFCAB12Q6NXP0 572 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 MYOCDQ8IZQ8 938 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 LRRC71Q8N4P6 559 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 C7orf31Q8N865 590 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 GLIS3Q8NEA6 775 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 ZNF507Q8TCN5 953 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 ASAP3Q8TDY4 903 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 SCFD1Q8WVM8 642 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 PSPC1Q8WXF1 523 aaKnown RBP17.82■□□□□ 0.44
SS18-226ENST00000585241 DHTKD1Q96HY7 919 aaPredicted RBP17.82■□□□□ 0.44
SS18-226ENST00000585241 IFT74Q96LB3 600 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 DEFB118Q96PH6 123 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 MRPL44Q9H9J2 332 aaKnown RBP17.82■□□□□ 0.44
SS18-226ENST00000585241 ARHGAP28Q9P2N2 729 aa17.82■□□□□ 0.44
SS18-226ENST00000585241 SMIM35A0A1B0GVV1 85 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 ASAP2O43150 1006 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 KIF20AO95235 890 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 GJB1P08034 283 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 NMT1P30419 496 aaKnown RBP17.81■□□□□ 0.44
SS18-226ENST00000585241 ABCD1P33897 745 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 STIM1Q13586 685 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 IQCB1Q15051 598 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 SLC43A3Q8NBI5 491 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 HVCN1Q96D96 273 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 TBC1D7Q9P0N9 293 aa17.81■□□□□ 0.44
SS18-226ENST00000585241 SUCLA2Q9P2R7 463 aaPredicted RBP17.81■□□□□ 0.44
SS18-226ENST00000585241 ADGRA3Q8IWK6 1321 aa17.8■□□□□ 0.44
SS18-226ENST00000585241 FSD2A1L4K1 749 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms