RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 GLP2RO95838 553 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 EOMESO95936 686 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 OATP04181 439 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 SRGAP2BP0DMP2 458 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 PPM1AP35813 382 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 DUSP6Q16828 381 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 Q4G0T1 1027 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 BMP8AQ7Z5Y6 402 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 RBM23Q86U06 439 aaKnown RBP16.94■□□□□ 0.3
VAPA-209ENST00000585042 MRPS27Q92552 414 aaKnown RBP16.94■□□□□ 0.3
VAPA-209ENST00000585042 EDAQ92838 391 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 CASD1Q96PB1 797 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 SLC26A6Q9BXS9 759 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 NGRNQ9NPE2 291 aaKnown RBP16.94■□□□□ 0.3
VAPA-209ENST00000585042 PLXNA4Q9HCM2 1894 aa16.94■□□□□ 0.3
VAPA-209ENST00000585042 C5orf42Q9H799 3197 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 CYP3A7-CYP3A51PA0A087WV96 503 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 A0A0U1RQF3 1178 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 CARNS1A5YM72 827 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 FGFR1P11362 822 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 CYP3A7P24462 503 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 CLCN3P51790 818 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 NLRP5P59047 1200 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 ERVFC1P60507 584 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 KRT17Q04695 432 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 GALNT17Q6IS24 598 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 TRMT1LQ7Z2T5 733 aaKnown RBP16.93■□□□□ 0.3
VAPA-209ENST00000585042 ECHDC2Q86YB7 292 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 TRIM22Q8IYM9 498 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 PHF7Q9BWX1 381 aaPredicted RBP16.93■□□□□ 0.3
VAPA-209ENST00000585042 TEKT3Q9BXF9 490 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 NIFKQ9BYG3 293 aaKnown RBP16.93■□□□□ 0.3
VAPA-209ENST00000585042 CHST12Q9NRB3 414 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 DACT1Q9NYF0 836 aa16.93■□□□□ 0.3
VAPA-209ENST00000585042 MUC6Q6W4X9 2439 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 WDR81Q562E7 1941 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 PSMD10O75832 226 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 CSPG5O95196 566 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 DARSP14868 501 aaKnown RBP16.92■□□□□ 0.3
VAPA-209ENST00000585042 IBSPP21815 317 aaPredicted RBP16.92■□□□□ 0.3
VAPA-209ENST00000585042 GPC3P51654 580 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 PRKCEQ02156 737 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 SSRP1Q08945 709 aaKnown RBP16.92■□□□□ 0.3
VAPA-209ENST00000585042 TBC1D8BQ0IIM8 1120 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 KCNC3Q14003 757 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 TARBP2Q15633 366 aaKnown RBP16.92■□□□□ 0.3
VAPA-209ENST00000585042 LRCH2Q5VUJ6 765 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 KCNT2Q6UVM3 1135 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 MOXD1Q6UVY6 613 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 RUFY3Q7L099 469 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 ABI1Q8IZP0 508 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 LRRC43Q8N309 656 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 SUSD6Q92537 303 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 ZNF274Q96GC6 653 aaPredicted RBP16.92■□□□□ 0.3
VAPA-209ENST00000585042 ZNF558Q96NG5 402 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 PPP1R16BQ96T49 567 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 ZSWIM6Q9HCJ5 1215 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 VPS54Q9P1Q0 977 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 MUTYHQ9UIF7 546 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 PCDHA4Q9UN74 947 aa16.92■□□□□ 0.3
VAPA-209ENST00000585042 USP15Q9Y4E8 981 aaPredicted RBP16.92■□□□□ 0.3
VAPA-209ENST00000585042 HOXB8P17481 243 aaPredicted RBP16.91■□□□□ 0.3
VAPA-209ENST00000585042 DNM2P50570 870 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 XKR3Q5GH77 459 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 ERICH6BQ5W0A0 696 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 B3GNT9Q6UX72 402 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 LRRC55Q6ZSA7 311 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 HFE2Q6ZVN8 426 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 LRRC71Q8N4P6 559 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 TBCKQ8TEA7 893 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 INO80BQ9C086 356 aaPredicted RBP16.91■□□□□ 0.3
VAPA-209ENST00000585042 UNC45AQ9H3U1 944 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 RNF19AQ9NV58 838 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 SPG21Q9NZD8 308 aa16.91■□□□□ 0.3
VAPA-209ENST00000585042 BARX2Q9UMQ3 279 aaPredicted RBP16.91■□□□□ 0.3
VAPA-209ENST00000585042 PIEZO1Q92508 2521 aa16.9■□□□□ 0.3
VAPA-209ENST00000585042 PER2O15055 1255 aa16.9■□□□□ 0.3
VAPA-209ENST00000585042 DEXIO95424 95 aa16.9■□□□□ 0.3
VAPA-209ENST00000585042 CCT2P78371 535 aaKnown RBP16.9■□□□□ 0.3
VAPA-209ENST00000585042 CPLX2Q6PUV4 134 aaKnown RBP16.9■□□□□ 0.3
VAPA-209ENST00000585042 MIER3Q7Z3K6 550 aa16.9■□□□□ 0.3
VAPA-209ENST00000585042 DAGLBQ8NCG7 672 aa16.9■□□□□ 0.3
VAPA-209ENST00000585042 MBOAT7Q96N66 472 aa16.9■□□□□ 0.3
VAPA-209ENST00000585042 MRPL9Q9BYD2 267 aaKnown RBP16.9■□□□□ 0.3
VAPA-209ENST00000585042 GCOM2Q9BZD3 368 aaPredicted RBP16.9■□□□□ 0.3
VAPA-209ENST00000585042 TM6SF1Q9BZW5 370 aa16.9■□□□□ 0.3
VAPA-209ENST00000585042 PCDHGC5Q9Y5F6 944 aa16.9■□□□□ 0.3
VAPA-209ENST00000585042 TRIOO75962 3097 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 IGKV6-21A0A0C4DH24 114 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 M0R2N6 131 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 SKIP12755 728 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 TOB2Q14106 344 aaPredicted RBP16.89■□□□□ 0.29
VAPA-209ENST00000585042 BMS1Q14692 1282 aaKnown RBP16.89■□□□□ 0.29
VAPA-209ENST00000585042 UGCGQ16739 394 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 TRIM67Q6ZTA4 783 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 ZNF598Q86UK7 904 aaKnown RBP16.89■□□□□ 0.29
VAPA-209ENST00000585042 ZNF410Q86VK4 478 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 EXOC8Q8IYI6 725 aa16.89■□□□□ 0.29
VAPA-209ENST00000585042 BLIDQ8IZY5 108 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms