RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 COL4A6Q14031 1691 aa6.13□□□□□ -1.43
VAPA-207ENST00000583879 WDFY4Q6ZS81 3184 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 ERICH2A1L162 156 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 RRN3P2A6NIE6 340 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 PIK3CDO00329 1044 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 MEIS2O14770 477 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 IFIT3O14879 490 aaKnown RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 PER2O15055 1255 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 MAFGO15525 162 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 LILRB3O75022 631 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 RPLP2P05387 115 aaKnown RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 SIP14410 1827 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 KCNA2P16389 499 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 ATF7P17544 494 aaPredicted RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 ITGB5P18084 799 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 AVPR2P30518 371 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 CD52P31358 61 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 MRPS6P82932 125 aaKnown RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 SIGLEC14Q08ET2 396 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 TRDNQ13061 729 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 PPFIA1Q13136 1202 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 ZNF385CQ66K41 422 aaPredicted RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 B4GALNT3Q6L9W6 998 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 FAM43BQ6ZT52 329 aaPredicted RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 VASH1Q7L8A9 365 aaPredicted RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 CHD1LQ86WJ1 897 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 SMC5Q8IY18 1101 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 NME8Q8N427 588 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 ATP8B4Q8TF62 1192 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 LINC01599Q8WXQ3 324 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 NANOS1Q8WY41 292 aaKnown RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 GLG1Q92896 1179 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 TNPO1Q92973 898 aaKnown RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 CUL5Q93034 780 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 GPRASP2Q96D09 838 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 ASIC4Q96FT7 647 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 CDHR1Q96JP9 859 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 RPGRIP1Q96KN7 1286 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 TLE6Q9H808 572 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 TUBE1Q9UJT0 475 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 PADI3Q9ULW8 664 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 BARX2Q9UMQ3 279 aaPredicted RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 USP15Q9Y4E8 981 aaPredicted RBP6.12□□□□□ -1.43
VAPA-207ENST00000583879 PCDHA2Q9Y5H9 948 aa6.12□□□□□ -1.43
VAPA-207ENST00000583879 M0QZ92 97 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 GLP2RO95838 553 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 IGHA1P01876 353 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 CYP21A2P08686 494 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 SCG2P13521 617 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 INSRRP14616 1297 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 MARK3P27448 753 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 SMARCA1P28370 1054 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 VCPP55072 806 aaKnown RBP6.11□□□□□ -1.43
VAPA-207ENST00000583879 IGBP1P78318 339 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 UBE3AQ05086 875 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 WTAPQ15007 396 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 DUSP6Q16828 381 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 PAN2Q504Q3 1202 aaKnown RBP6.11□□□□□ -1.43
VAPA-207ENST00000583879 PDE12Q6L8Q7 609 aaKnown RBP6.11□□□□□ -1.43
VAPA-207ENST00000583879 TMEM184AQ6ZMB5 413 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 CATIPQ7Z7H3 387 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 CCDC116Q8IYX3 515 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 IGDCC4Q8TDY8 1250 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 PIBF1Q8WXW3 757 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 SUSD6Q92537 303 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 ATOH1Q92858 354 aaPredicted RBP6.11□□□□□ -1.43
VAPA-207ENST00000583879 ZBTB10Q96DT7 871 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 RIPOR3Q96MK2 946 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 CDCA3Q99618 268 aaPredicted RBP6.11□□□□□ -1.43
VAPA-207ENST00000583879 CELF4Q9BZC1 486 aaKnown RBP6.11□□□□□ -1.43
VAPA-207ENST00000583879 S1PR5Q9H228 398 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 RWDD1Q9H446 243 aaPredicted RBP6.11□□□□□ -1.43
VAPA-207ENST00000583879 PSTPIP2Q9H939 334 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 JADE2Q9NQC1 790 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 LRFN2Q9ULH4 789 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 MAP4K5Q9Y4K4 846 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 PCDHB7Q9Y5E2 793 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 PCDHB12Q9Y5F1 795 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 PCDHGC5Q9Y5F6 944 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 TRPV2Q9Y5S1 764 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 UBIAD1Q9Y5Z9 338 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 DNMT3AQ9Y6K1 912 aaPredicted RBP6.11□□□□□ -1.43
VAPA-207ENST00000583879 MUC6Q6W4X9 2439 aa6.11□□□□□ -1.43
VAPA-207ENST00000583879 IGSF9BQ9UPX0 1349 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 KDM3AQ9Y4C1 1321 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 FSD2A1L4K1 749 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 FIGNL2A6NMB9 653 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 SARSP49591 514 aaKnown RBP6.1□□□□□ -1.43
VAPA-207ENST00000583879 GATMP50440 423 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 STAT5BP51692 787 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 MARSP56192 900 aaKnown RBP6.1□□□□□ -1.43
VAPA-207ENST00000583879 ERVFC1P60507 584 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 RBM10P98175 930 aaKnown RBP6.1□□□□□ -1.43
VAPA-207ENST00000583879 FOXK2Q01167 660 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 NUCB1Q02818 461 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 PDE4CQ08493 712 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 TMEM62Q0P6H9 643 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 PAK2Q13177 524 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 MTMR1Q13613 665 aa6.1□□□□□ -1.43
VAPA-207ENST00000583879 KCNC3Q14003 757 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms