RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	DHX37	Q8IY37	1157 aa	Known RBP	6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	CMTR1	Q8N1G2	835 aa	Known RBP	6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	PNPLA1	Q8N8W4	532 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	SPATA3	Q8NHX4	192 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	NXPE2	Q96DL1	559 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	MOCOS	Q96EN8	888 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	ZBP1	Q9H171	429 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	ADAMTS10	Q9H324	1103 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	HEBP1	Q9NRV9	189 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	TYW1	Q9NV66	732 aa	Known RBP	6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	CYP39A1	Q9NYL5	469 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	PKD1L1	Q8TDX9	2849 aa		6.02	□□□□□ -1.45
MSI2-216	ENST00000582772	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	PATE3	B3GLJ2	98 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	GRM8	O00222	908 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	ATP9A	O75110	1047 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	ZBED4	O75132	1171 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	CHRNA1	P02708	482 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	ATXN8OS	P0DMR3	200 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	GHR	P10912	638 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	SCG2	P13521	617 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	CD59	P13987	128 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	EDNRB	P24530	442 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	ALDH5A1	P51649	535 aa	Predicted RBP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	RIPK4	P57078	832 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	TMPRSS3	P57727	454 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	TLE1	Q04724	770 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	MGAT3	Q09327	533 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	SLC14A1	Q13336	389 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	TKFC	Q3LXA3	575 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	FAM83B	Q5T0W9	1011 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	C6orf132	Q5T0Z8	1188 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	SPOUT1	Q5T280	376 aa	Known RBP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	CCDC62	Q6P9F0	684 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	KCNT2	Q6UVM3	1135 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	TSHZ1	Q6ZSZ6	1077 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	SPACA3	Q8IXA5	215 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	CPXCR1	Q8N123	301 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	SPATA20	Q8TB22	786 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	ATP6V0A1	Q93050	837 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	KAZALD1	Q96I82	304 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	NOL10	Q9BSC4	688 aa	Known RBP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	PNN	Q9H307	717 aa	Known RBP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	RAVER2	Q9HCJ3	691 aa	Known RBP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	TRPV5	Q9NQA5	729 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	AATF	Q9NY61	560 aa	Known RBP eCLIP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	HCST	Q9UBK5	93 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	ADD3	Q9UEY8	706 aa	Known RBP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	SAP30BP	Q9UHR5	308 aa	Known RBP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	NDRG2	Q9UN36	371 aa	Known RBP	6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	VWA8	A3KMH1	1905 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	KAT6A	Q92794	2004 aa		6.01	□□□□□ -1.45
MSI2-216	ENST00000582772	MYO5A	Q9Y4I1	1855 aa	Known RBP	6	□□□□□ -1.45
MSI2-216	ENST00000582772	IGSF3	O75054	1194 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	FAM155B	O75949	473 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	ARIH2	O95376	493 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	FDX1	P10109	184 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	TXN	P10599	105 aa	Known RBP	6	□□□□□ -1.45
MSI2-216	ENST00000582772	CTSA	P10619	480 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	ENG	P17813	658 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	RPL17	P18621	184 aa	Known RBP	6	□□□□□ -1.45
MSI2-216	ENST00000582772	DCT	P40126	519 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	POLG	P54098	1239 aa	Predicted RBP	6	□□□□□ -1.45
MSI2-216	ENST00000582772	MLLT6	P55198	1093 aa	Predicted RBP	6	□□□□□ -1.45
MSI2-216	ENST00000582772	FOXK1	P85037	733 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	LRRC32	Q14392	662 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	PREPL	Q4J6C6	727 aa	Predicted RBP	6	□□□□□ -1.45
MSI2-216	ENST00000582772	PMS2CL	Q68D20	193 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	CCDC102B	Q68D86	513 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	ZNF787	Q6DD87	383 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	XKR5	Q6UX68	686 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	AGMO	Q6ZNB7	445 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	TTC6	Q86TZ1	520 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	SLCO6A1	Q86UG4	719 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	SLC39A11	Q8N1S5	342 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	ZNF710	Q8N1W2	664 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	HDDC3	Q8N4P3	179 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	DNAAF4	Q8WXU2	420 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	ZNF707	Q96C28	371 aa	Predicted RBP	6	□□□□□ -1.45
MSI2-216	ENST00000582772	ZNF558	Q96NG5	402 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	ALG1	Q9BT22	464 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	GOPC	Q9HD26	462 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	C2orf42	Q9NWW7	574 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	SPG21	Q9NZD8	308 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	DKK3	Q9UBP4	350 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	CDH7	Q9ULB5	785 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	SQOR	Q9Y6N5	450 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	GON4L	Q3T8J9	2241 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	NOTCH1	P46531	2555 aa		6	□□□□□ -1.45
MSI2-216	ENST00000582772	PLXND1	Q9Y4D7	1925 aa		5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	CCDC168	Q8NDH2	2452 aa		5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	CCDC195	A0A1B0GUA6	201 aa		5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	C17orf102	A2RUQ5	167 aa		5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	CXCL14	O95715	111 aa		5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	GH1	P01241	217 aa		5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	SARS	P49591	514 aa	Known RBP	5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	ADAM17	P78536	824 aa		5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	KCNH2	Q12809	1159 aa		5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	SMAD1	Q15797	465 aa	Known RBP	5.99	□□□□□ -1.45
MSI2-216	ENST00000582772	ATP2B3	Q16720	1220 aa		5.99	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms