RNA–Protein interactions for RNA: ENST00000581391.5

CUEDC1-209, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-209ENST00000581391 SRGAP2CP0DJJ0 459 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 FXR2P51116 673 aaKnown RBP eCLIP15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 ORC2Q13416 577 aaPredicted RBP15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 EMC2Q15006 297 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 RILPL1Q5EBL4 403 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 FOXD4L5Q5VV16 416 aaPredicted RBP15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 OTUD6AQ7L8S5 288 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 USP38Q8NB14 1042 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 PRPF31Q8WWY3 499 aaKnown RBP15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 FOXD4L4Q8WXT5 416 aaPredicted RBP15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 ARNTL2Q8WYA1 636 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 INTS4Q96HW7 963 aaKnown RBP15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 NLRP4Q96MN2 994 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 SCLT1Q96NL6 688 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 ADAM2Q99965 735 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 POLR3CQ9BUI4 534 aaPredicted RBP15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 LRWD1Q9UFC0 647 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 MTMR6Q9Y217 621 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 PRUNE2Q8WUY3 3088 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 ARID2Q68CP9 1835 aa15.2■□□□□ 0.02
CUEDC1-209ENST00000581391 LINC01553A4QN01 128 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 DARSP14868 501 aaKnown RBP15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 EIF4BP23588 611 aaKnown RBP15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 CCT6AP40227 531 aaKnown RBP15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 RARRES1P49788 294 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 DNM2P50570 870 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 HTRA4P83105 476 aaPredicted RBP15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 ATP2C1P98194 919 aaPredicted RBP15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 GRIN1Q05586 938 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 RESTQ13127 1097 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 ASAP3Q8TDY4 903 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 PLIN2Q99541 437 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 C17orf80Q9BSJ5 609 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 MMTAG2Q9BU76 263 aaKnown RBP15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 TSPYL2Q9H2G4 693 aaPredicted RBP15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 MINDY3Q9H8M7 445 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 TUFT1Q9NNX1 390 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 GPRC5CQ9NQ84 441 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 ANKEF1Q9NU02 776 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 CLIC4Q9Y696 253 aa15.19■□□□□ 0.02
CUEDC1-209ENST00000581391 TMEM265A0A087WTH1 108 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 GPR182O15218 404 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 USO1O60763 962 aaKnown RBP15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 RPA1P27694 616 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 LAMTOR4Q0VGL1 99 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 DSC3Q14574 896 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 ZRSR1Q15695 479 aaKnown RBP15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 DTHD1Q6ZMT9 781 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 HSCBQ8IWL3 235 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 CRIPAKQ8N1N5 446 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 IGSF22Q8N9C0 903 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 NEK9Q8TD19 979 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 SLC7A3Q8WY07 619 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 YME1L1Q96TA2 773 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 IFT122Q9HBG6 1241 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 KIAA1024Q9UPX6 916 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 STXBP5LQ9Y2K9 1186 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 INSL6Q9Y581 213 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 COL4A3BPQ9Y5P4 624 aa15.18■□□□□ 0.02
CUEDC1-209ENST00000581391 VWA3AA6NCI4 1184 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 E9PMD0 336 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 FOSL2P15408 326 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 IGFBP4P22692 258 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 RFC5P40937 340 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 CEBPZQ03701 1054 aaKnown RBP15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 PDIA5Q14554 519 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 SF3A1Q15459 793 aaKnown RBP15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 PAN2Q504Q3 1202 aaKnown RBP15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 FAM102BQ5T8I3 360 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 KCNK18Q7Z418 384 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 ERMNQ8TAM6 284 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 SNX29Q8TEQ0 813 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 PPM1EQ8WY54 764 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 NACC1Q96RE7 527 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 MTRQ99707 1265 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 FTHL17Q9BXU8 183 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 GCOM2Q9BZD3 368 aaPredicted RBP15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 RGS18Q9NS28 235 aa15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 DDX19AQ9NUU7 478 aaKnown RBP15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 PRRC2BQ5JSZ5 2229 aaKnown RBP15.17■□□□□ 0.02
CUEDC1-209ENST00000581391 MYO7AQ13402 2215 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 DENND3A2RUS2 1198 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 C9IYK1 514 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 STX6O43752 255 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 DGKIO75912 1065 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 XRCC6P12956 609 aaKnown RBP eCLIP15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 PDCP20941 246 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 ARL2P36404 184 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 CCDC85BQ15834 202 aaPredicted RBP15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 LONRF3Q496Y0 759 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 BRAPQ7Z569 592 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 RNF149Q8NC42 400 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 SP7Q8TDD2 431 aaPredicted RBP15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 PSPC1Q8WXF1 523 aaKnown RBP15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 PNMA5Q96PV4 448 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 HCSTQ9UBK5 93 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 REV3LO60673 3130 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 COL4A6Q14031 1691 aa15.16■□□□□ 0.02
CUEDC1-209ENST00000581391 LPXNO60711 386 aa15.15■□□□□ 0.02
CUEDC1-209ENST00000581391 FGFR1P11362 822 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms