RNA–Protein interactions for RNA: ENST00000581045.1

CDC42EP4-207, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-207ENST00000581045 KRT85P78386 507 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 DHX8Q14562 1220 aaKnown RBP14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 FAM102BQ5T8I3 360 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 CNKSR3Q6P9H4 555 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 PADI6Q6TGC4 694 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 DBF4BQ8NFT6 615 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 TMEM40Q8WWA1 233 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 IFIH1Q9BYX4 1025 aaKnown RBP14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 NT5C3AQ9H0P0 336 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 POLD4Q9HCU8 107 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 GPRC5CQ9NQ84 441 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 XPNPEP1Q9NQW7 623 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 RBM19Q9Y4C8 960 aaKnown RBP14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 PPME1Q9Y570 386 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 ATP6V1DQ9Y5K8 247 aa14.52□□□□□ -0.09
CDC42EP4-207ENST00000581045 A0A087WZ62 844 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 PPP6R2O75170 966 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 CSDE1O75534 798 aaKnown RBP14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 DGAT1O75907 488 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 EYA4O95677 639 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 CXCL10P02778 98 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 SRGAP2CP0DJJ0 459 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 FGFR4P22455 802 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 TXLNAP40222 546 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 NFX1Q12986 1120 aaKnown RBP14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 PAK2Q13177 524 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 TMEM119Q4V9L6 283 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 PLEKHG4Q58EX7 1191 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 HYIQ5T013 277 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 ATL3Q6DD88 541 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 TSHZ1Q6ZSZ6 1077 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 EXOC8Q8IYI6 725 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 KCNG4Q8TDN1 519 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 TCP11Q8WWU5 503 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 PRPF31Q8WWY3 499 aaKnown RBP14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 PSPC1Q8WXF1 523 aaKnown RBP14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 SEPT8Q92599 483 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 SPATA32Q96LK8 384 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 FDXACB1Q9BRP7 624 aaPredicted RBP14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 PANK2Q9BZ23 570 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 POLR3FQ9H1D9 316 aaPredicted RBP14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 AGO3Q9H9G7 860 aaKnown RBP14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 CXXC1Q9P0U4 656 aaPredicted RBP14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 NOC2LQ9Y3T9 749 aaKnown RBP14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 COL4A3BPQ9Y5P4 624 aa14.51□□□□□ -0.09
CDC42EP4-207ENST00000581045 GAS2O43903 313 aaKnown RBP14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 CUTAO60888 179 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 RPS6KA5O75582 802 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 CRYBB1P53674 252 aaPredicted RBP14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 RAD51AP2Q09MP3 1159 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 LAMTOR4Q0VGL1 99 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 PDILTQ8N807 584 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 ASAP3Q8TDY4 903 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 LRRC15Q8TF66 581 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 HERVK_113Q902F9 699 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 MTIF3Q9H2K0 278 aaKnown RBP14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 ADAMTS10Q9H324 1103 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 GDPD2Q9HCC8 539 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 CCDC39Q9UFE4 941 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 PADI3Q9ULW8 664 aa14.5□□□□□ -0.09
CDC42EP4-207ENST00000581045 PLA2G4BP0C869 781 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 KCNJ6P48051 423 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 IKBKEQ14164 716 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 MCM6Q14566 821 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 TMCO2Q7Z6W1 182 aaPredicted RBP14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 FAM228AQ86W67 206 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 RNF149Q8NC42 400 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 MCPH1Q8NEM0 835 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 LEO1Q8WVC0 666 aaPredicted RBP14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 RUSC1Q9BVN2 902 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 GCOM2Q9BZD3 368 aaPredicted RBP14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 CCSER1Q9C0I3 900 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 PCDHA7Q9UN72 937 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 SLC4A7Q9Y6M7 1214 aa14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 MORC2Q9Y6X9 1032 aaPredicted RBP14.49□□□□□ -0.09
CDC42EP4-207ENST00000581045 NPHP3-ACAD11A0A0J9YXS1 232 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 GRXCR1A8MXD5 290 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 CYP11B2P19099 503 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 STAT6P42226 847 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 WDR5P61964 334 aaKnown RBP14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 DEFB103AP81534 67 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 CACNB1Q02641 598 aaPredicted RBP14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 HABP4Q5JVS0 413 aaKnown RBP14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 RRAGBQ5VZM2 374 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 FAM109BQ6ICB4 259 aaPredicted RBP14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 FAM117BQ6P1L5 589 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 SHC4Q6S5L8 630 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 GPBP1Q86WP2 473 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 USP38Q8NB14 1042 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 APBB2Q92870 758 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 RCOR1Q9UKL0 485 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 ST3GAL5Q9UNP4 418 aa14.48□□□□□ -0.09
CDC42EP4-207ENST00000581045 TRIOBPQ9H2D6 2365 aa14.47□□□□□ -0.09
CDC42EP4-207ENST00000581045 A0A087X0B3 334 aa14.47□□□□□ -0.09
CDC42EP4-207ENST00000581045 ABHD14A-ACY1A0A1B0GW23 586 aa14.47□□□□□ -0.09
CDC42EP4-207ENST00000581045 A0A1W2PPC1 479 aa14.47□□□□□ -0.09
CDC42EP4-207ENST00000581045 LRRIQ4A6NIV6 560 aa14.47□□□□□ -0.09
CDC42EP4-207ENST00000581045 SLC26A4O43511 780 aa14.47□□□□□ -0.09
CDC42EP4-207ENST00000581045 HIP1RO75146 1068 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms