RNA–Protein interactions for RNA: ENST00000580824.5

CDC6-204, Transcript of cell division cycle 6, humanhuman

TSL 3

Gene CDC6, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6-204ENST00000580824 CYP11B2P19099 503 aa17.13■□□□□ 0.33
CDC6-204ENST00000580824 NLRP11P59045 1033 aaKnown RBP17.13■□□□□ 0.33
CDC6-204ENST00000580824 POU5F1BQ06416 359 aa17.13■□□□□ 0.33
CDC6-204ENST00000580824 TMEM62Q0P6H9 643 aa17.13■□□□□ 0.33
CDC6-204ENST00000580824 DRP2Q13474 957 aa17.13■□□□□ 0.33
CDC6-204ENST00000580824 MXD4Q14582 209 aaPredicted RBP17.13■□□□□ 0.33
CDC6-204ENST00000580824 SHHQ15465 462 aa17.13■□□□□ 0.33
CDC6-204ENST00000580824 C9orf50Q5SZB4 431 aa17.13■□□□□ 0.33
CDC6-204ENST00000580824 PADI6Q6TGC4 694 aa17.13■□□□□ 0.33
CDC6-204ENST00000580824 SYMPKQ92797 1274 aaKnown RBP17.13■□□□□ 0.33
CDC6-204ENST00000580824 IFIH1Q9BYX4 1025 aaKnown RBP17.13■□□□□ 0.33
CDC6-204ENST00000580824 SCAND2PQ9GZW5 306 aaPredicted RBP17.13■□□□□ 0.33
CDC6-204ENST00000580824 COL4A3BPQ9Y5P4 624 aa17.13■□□□□ 0.33
CDC6-204ENST00000580824 ARL2P36404 184 aa17.12■□□□□ 0.33
CDC6-204ENST00000580824 KIZQ2M2Z5 673 aa17.12■□□□□ 0.33
CDC6-204ENST00000580824 LRIT3Q3SXY7 679 aa17.12■□□□□ 0.33
CDC6-204ENST00000580824 AXDND1Q5T1B0 1012 aaPredicted RBP17.12■□□□□ 0.33
CDC6-204ENST00000580824 RNPC3Q96LT9 517 aaKnown RBP17.12■□□□□ 0.33
CDC6-204ENST00000580824 CLIC6Q96NY7 704 aa17.12■□□□□ 0.33
CDC6-204ENST00000580824 TIPINQ9BVW5 301 aa17.12■□□□□ 0.33
CDC6-204ENST00000580824 FTHL17Q9BXU8 183 aa17.12■□□□□ 0.33
CDC6-204ENST00000580824 STK17AQ9UEE5 414 aa17.12■□□□□ 0.33
CDC6-204ENST00000580824 CCDC39Q9UFE4 941 aa17.12■□□□□ 0.33
CDC6-204ENST00000580824 E9PMD0 336 aa17.11■□□□□ 0.33
CDC6-204ENST00000580824 USO1O60763 962 aaKnown RBP17.11■□□□□ 0.33
CDC6-204ENST00000580824 GHRP10912 638 aa17.11■□□□□ 0.33
CDC6-204ENST00000580824 DARSP14868 501 aaKnown RBP17.11■□□□□ 0.33
CDC6-204ENST00000580824 EIF4BP23588 611 aaKnown RBP17.11■□□□□ 0.33
CDC6-204ENST00000580824 IKBKEQ14164 716 aa17.11■□□□□ 0.33
CDC6-204ENST00000580824 PCBP1Q15365 356 aaKnown RBP eCLIP17.11■□□□□ 0.33
CDC6-204ENST00000580824 FOXD4L6Q3SYB3 417 aaPredicted RBP17.11■□□□□ 0.33
CDC6-204ENST00000580824 FOXD4L3Q6VB84 417 aaPredicted RBP17.11■□□□□ 0.33
CDC6-204ENST00000580824 KCNK18Q7Z418 384 aa17.11■□□□□ 0.33
CDC6-204ENST00000580824 IFNLR1Q8IU57 520 aaPredicted RBP17.11■□□□□ 0.33
CDC6-204ENST00000580824 RHPN2Q8IUC4 686 aa17.11■□□□□ 0.33
CDC6-204ENST00000580824 SYT2Q8N9I0 419 aaPredicted RBP17.11■□□□□ 0.33
CDC6-204ENST00000580824 DBF4BQ8NFT6 615 aa17.11■□□□□ 0.33
CDC6-204ENST00000580824 PRPF31Q8WWY3 499 aaKnown RBP17.11■□□□□ 0.33
CDC6-204ENST00000580824 TMEM143Q96AN5 459 aa17.11■□□□□ 0.33
CDC6-204ENST00000580824 EPSTI1Q96J88 318 aa17.11■□□□□ 0.33
CDC6-204ENST00000580824 NFKBIZQ9BYH8 718 aa17.11■□□□□ 0.33
CDC6-204ENST00000580824 INO80BQ9C086 356 aaPredicted RBP17.11■□□□□ 0.33
CDC6-204ENST00000580824 A0A087WWV3 80 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 GPR182O15218 404 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 RPS6KA5O75582 802 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 PLCG1P19174 1290 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 GUCY2CP25092 1073 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 ME1P48163 572 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 SLC12A3P55017 1021 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 LAMTOR4Q0VGL1 99 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 PAK2Q13177 524 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 TFDP1Q14186 410 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 KARSQ15046 597 aaKnown RBP17.1■□□□□ 0.33
CDC6-204ENST00000580824 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
CDC6-204ENST00000580824 CCDC73Q6ZRK6 1079 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 USP49Q70CQ1 688 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 OTOP2Q7RTS6 562 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 RASSF8Q8NHQ8 419 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 PHOSPHO2Q8TCD6 241 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 LEO1Q8WVC0 666 aaPredicted RBP17.1■□□□□ 0.33
CDC6-204ENST00000580824 TMEM40Q8WWA1 233 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 NLRP7Q8WX94 980 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 KIFAP3Q92845 792 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 OSMRQ99650 979 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 GCOM2Q9BZD3 368 aaPredicted RBP17.1■□□□□ 0.33
CDC6-204ENST00000580824 OSBPL7Q9BZF2 842 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 AGO3Q9H9G7 860 aaKnown RBP17.1■□□□□ 0.33
CDC6-204ENST00000580824 ERVK-5Q9HDB9 667 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 BLOC1S4Q9NUP1 217 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 PADI3Q9ULW8 664 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 PCDHA7Q9UN72 937 aa17.1■□□□□ 0.33
CDC6-204ENST00000580824 LAMA3Q16787 3333 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 PLA2G4BP0C869 781 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 RINT1Q6NUQ1 792 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 C1orf186Q6ZWK4 172 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 SRGAP1Q7Z6B7 1085 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 RAD54LQ92698 747 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 SPATA32Q96LK8 384 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 SCLT1Q96NL6 688 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 SLC9A7Q96T83 725 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 POLR3FQ9H1D9 316 aaPredicted RBP17.09■□□□□ 0.33
CDC6-204ENST00000580824 C17orf75Q9HAS0 396 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 CDHR5Q9HBB8 845 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 IFT122Q9HBG6 1241 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 TSHZ2Q9NRE2 1034 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 GINS2Q9Y248 185 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 NOC2LQ9Y3T9 749 aaKnown RBP17.09■□□□□ 0.33
CDC6-204ENST00000580824 RBM19Q9Y4C8 960 aaKnown RBP17.09■□□□□ 0.33
CDC6-204ENST00000580824 TTC3P53804 2025 aa17.09■□□□□ 0.33
CDC6-204ENST00000580824 A0A087WZ62 844 aa17.08■□□□□ 0.32
CDC6-204ENST00000580824 NCLP19338 710 aaKnown RBP17.08■□□□□ 0.32
CDC6-204ENST00000580824 SFPQP23246 707 aaKnown RBP eCLIP17.08■□□□□ 0.32
CDC6-204ENST00000580824 GLRA2P23416 452 aa17.08■□□□□ 0.32
CDC6-204ENST00000580824 CD52P31358 61 aa17.08■□□□□ 0.32
CDC6-204ENST00000580824 PHKA2P46019 1235 aa17.08■□□□□ 0.32
CDC6-204ENST00000580824 WDR5P61964 334 aaKnown RBP17.08■□□□□ 0.32
CDC6-204ENST00000580824 PPP2R5AQ15172 486 aa17.08■□□□□ 0.32
CDC6-204ENST00000580824 SPECC1Q5M775 1068 aa17.08■□□□□ 0.32
CDC6-204ENST00000580824 SHC4Q6S5L8 630 aa17.08■□□□□ 0.32
CDC6-204ENST00000580824 FAM228AQ86W67 206 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms