RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 ITGB1P05556 798 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 DNAJB1P25685 340 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 KRT2P35908 639 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 EP400NLQ6ZTU2 488 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 KLHL23Q8NBE8 558 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 SPPL3Q8TCT6 385 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 TNFRSF25Q93038 417 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 SCLT1Q96NL6 688 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 RNF216Q9NWF9 866 aaPredicted RBP23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 PLXNA4Q9HCM2 1894 aa23.91■■□□□ 1.42
CSNK1D-215ENST00000580784 IGKV6-21A0A0C4DH24 114 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 H3BQ06 376 aaPredicted RBP23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 TBX3O15119 743 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 MARCH6O60337 910 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 CSDE1O75534 798 aaKnown RBP23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 MMP1P03956 469 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 FGFR1P11362 822 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 DARSP14868 501 aaKnown RBP23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 FGFR4P22455 802 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 COL19A1Q14993 1142 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 NAALADL2Q58DX5 795 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 POTEDQ86YR6 584 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 NEK9Q8TD19 979 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 NLRP7Q8WX94 980 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 PABPC5Q96DU9 382 aaKnown RBP23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 NAP1L4Q99733 375 aaKnown RBP23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 ATP6V0A4Q9HBG4 840 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 TMEM161AQ9NX61 479 aa23.9■■□□□ 1.42
CSNK1D-215ENST00000580784 MAFO75444 373 aaPredicted RBP23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 ZSCAN20P17040 1043 aaPredicted RBP23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 QARSP47897 775 aaKnown RBP23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 DNM2P50570 870 aa23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 FOSBP53539 338 aa23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 SPOUT1Q5T280 376 aaKnown RBP23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 PLA2G4FQ68DD2 849 aa23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 ELAC1Q9H777 363 aaKnown RBP23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 BRMS1Q9HCU9 246 aa23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 CLDND1Q9NY35 253 aa23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 WRAP73Q9P2S5 460 aaPredicted RBP23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 HCSTQ9UBK5 93 aa23.89■■□□□ 1.41
CSNK1D-215ENST00000580784 BTBD18B2RXH4 712 aa23.88■■□□□ 1.41
CSNK1D-215ENST00000580784 NPEPPSP55786 919 aa23.88■■□□□ 1.41
CSNK1D-215ENST00000580784 ST3GAL1Q11201 340 aa23.88■■□□□ 1.41
CSNK1D-215ENST00000580784 HYAL1Q12794 435 aa23.88■■□□□ 1.41
CSNK1D-215ENST00000580784 PTCRAQ6ISU1 281 aaPredicted RBP23.88■■□□□ 1.41
CSNK1D-215ENST00000580784 ZNF579Q8NAF0 562 aaKnown RBP23.88■■□□□ 1.41
CSNK1D-215ENST00000580784 TYW1Q9NV66 732 aaKnown RBP23.88■■□□□ 1.41
CSNK1D-215ENST00000580784 SUCLA2Q9P2R7 463 aaPredicted RBP23.88■■□□□ 1.41
CSNK1D-215ENST00000580784 A0A087WZ62 844 aa23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 P4HBP07237 508 aaKnown RBP23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 GTF2F1P35269 517 aaKnown RBP eCLIP23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 CDC42EP1Q00587 391 aa23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 EPHA7Q15375 998 aa23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 POF1BQ8WVV4 589 aa23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 FDXACB1Q9BRP7 624 aaPredicted RBP23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 GCOM2Q9BZD3 368 aaPredicted RBP23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 IGFLR1Q9H665 355 aa23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 CYP26B1Q9NR63 512 aa23.87■■□□□ 1.41
CSNK1D-215ENST00000580784 NCK2O43639 380 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 BAG4O95429 457 aaKnown RBP23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 IL9P15248 144 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 IRS1P35568 1242 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 LTBRP36941 435 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 SPIRE1Q08AE8 756 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 NCAPH2Q6IBW4 605 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 ECHDC2Q86YB7 292 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 RHPN2Q8IUC4 686 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 KSR1Q8IVT5 923 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 SLFN12Q8IYM2 578 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 RNF19AQ9NV58 838 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 RGL1Q9NZL6 768 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 PCDHB12Q9Y5F1 795 aa23.86■■□□□ 1.41
CSNK1D-215ENST00000580784 GRXCR2A6NFK2 248 aa23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 DKC1O60832 514 aaKnown RBP eCLIP23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 CTC1Q2NKJ3 1217 aa23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 DIS3L2Q8IYB7 885 aaKnown RBP23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 RNF169Q8NCN4 708 aa23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 DYDC2Q96IM9 177 aa23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 CASD1Q96PB1 797 aa23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 CWH43Q9H720 699 aa23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 CD320Q9NPF0 282 aa23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 AAASQ9NRG9 546 aa23.85■■□□□ 1.41
CSNK1D-215ENST00000580784 WNT7AO00755 349 aa23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 DLX2Q07687 328 aaPredicted RBP23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 TRIM29Q14134 588 aa23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 LRRC55Q6ZSA7 311 aa23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 FAM178BQ8IXR5 827 aa23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 COLGALT1Q8NBJ5 622 aa23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 CEP170P1Q96L14 293 aa23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 JPH2Q9BR39 696 aaPredicted RBP23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 LXNQ9BS40 222 aa23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 TMEM117Q9H0C3 514 aa23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 LIMCH1Q9UPQ0 1083 aa23.84■■□□□ 1.41
CSNK1D-215ENST00000580784 A0A0U1RQF3 1178 aa23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 ZBTB39O15060 712 aa23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 LINC01565O15544 149 aa23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 CYP4A11Q02928 519 aa23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 CTTNQ14247 550 aaKnown RBP23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 PUS10Q3MIT2 529 aaKnown RBP23.83■■□□□ 1.41
CSNK1D-215ENST00000580784 ADGRD2Q7Z7M1 963 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms