RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 RRAGBQ5VZM2 374 aa17.23■□□□□ 0.35
SS18-216ENST00000580751 KANK3Q6NY19 840 aa17.23■□□□□ 0.35
SS18-216ENST00000580751 BMP2KQ9NSY1 1161 aaPredicted RBP17.23■□□□□ 0.35
SS18-216ENST00000580751 DACT1Q9NYF0 836 aa17.23■□□□□ 0.35
SS18-216ENST00000580751 HOOK1Q9UJC3 728 aaKnown RBP17.23■□□□□ 0.35
SS18-216ENST00000580751 EVPLQ92817 2033 aa17.23■□□□□ 0.35
SS18-216ENST00000580751 A0A1B0GVL5 298 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 IQCF3P0C7M6 154 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 PLA2G4BP0C869 781 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 LIG1P18858 919 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 CYP11B2P19099 503 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 STAT6P42226 847 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 NDUFA8P51970 172 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 FPGSQ05932 587 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 TRAF7Q6Q0C0 670 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 SYT2Q8N9I0 419 aaPredicted RBP17.22■□□□□ 0.35
SS18-216ENST00000580751 IQUBQ8NA54 791 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 PSPC1Q8WXF1 523 aaKnown RBP17.22■□□□□ 0.35
SS18-216ENST00000580751 RAD54LQ92698 747 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 BADQ92934 168 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 CUEDC2Q9H467 287 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 XPNPEP1Q9NQW7 623 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 KCND2Q9NZV8 630 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 SUCLA2Q9P2R7 463 aaPredicted RBP17.22■□□□□ 0.35
SS18-216ENST00000580751 TRPV2Q9Y5S1 764 aa17.22■□□□□ 0.35
SS18-216ENST00000580751 NR1I2O75469 434 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 ZNF202O95125 648 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 VTNP04004 478 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 SSBP05455 408 aaKnown RBP eCLIP17.21■□□□□ 0.35
SS18-216ENST00000580751 PFKMP08237 780 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 MGAT3Q09327 533 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 TMEM62Q0P6H9 643 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 PPIGQ13427 754 aaKnown RBP eCLIP17.21■□□□□ 0.35
SS18-216ENST00000580751 MKRN4PQ13434 485 aaPredicted RBP17.21■□□□□ 0.35
SS18-216ENST00000580751 LARP4BQ92615 738 aaKnown RBP17.21■□□□□ 0.35
SS18-216ENST00000580751 TMEM143Q96AN5 459 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 SCLYQ96I15 445 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 TIPINQ9BVW5 301 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 CELF4Q9BZC1 486 aaKnown RBP17.21■□□□□ 0.35
SS18-216ENST00000580751 GOLPH3LQ9H4A5 285 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 MAGEF1Q9HAY2 307 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 BLOC1S4Q9NUP1 217 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 CDY2AQ9Y6F7 541 aa17.21■□□□□ 0.35
SS18-216ENST00000580751 CHRNA1P02708 482 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 CSF2RAP15509 400 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 MAGEA10P43363 369 aaPredicted RBP17.2■□□□□ 0.34
SS18-216ENST00000580751 SLC12A3P55017 1021 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 MDM2Q00987 491 aaPredicted RBP17.2■□□□□ 0.34
SS18-216ENST00000580751 DRP2Q13474 957 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 MXD4Q14582 209 aaPredicted RBP17.2■□□□□ 0.34
SS18-216ENST00000580751 RINT1Q6NUQ1 792 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 CAVIN1Q6NZI2 390 aaKnown RBP17.2■□□□□ 0.34
SS18-216ENST00000580751 RPUSD2Q8IZ73 545 aaKnown RBP17.2■□□□□ 0.34
SS18-216ENST00000580751 PDILTQ8N807 584 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 SCLT1Q96NL6 688 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 NUP62CLQ9H1M0 184 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 CLSTN2Q9H4D0 955 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 COL4A3BPQ9Y5P4 624 aa17.2■□□□□ 0.34
SS18-216ENST00000580751 A0A087X0B3 334 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 ASAP2O43150 1006 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 SLFN14P0C7P3 912 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 GUCY2CP25092 1073 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 GPC3P51654 580 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 CRYBB1P53674 252 aaPredicted RBP17.19■□□□□ 0.34
SS18-216ENST00000580751 NLRP11P59045 1033 aaKnown RBP17.19■□□□□ 0.34
SS18-216ENST00000580751 MBTPS1Q14703 1052 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 KIZQ2M2Z5 673 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 NAALADL2Q58DX5 795 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 FAM102BQ5T8I3 360 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 C1orf186Q6ZWK4 172 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 ZNF410Q86VK4 478 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 RHPN2Q8IUC4 686 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 USP38Q8NB14 1042 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 PRPF31Q8WWY3 499 aaKnown RBP17.19■□□□□ 0.34
SS18-216ENST00000580751 NLRP7Q8WX94 980 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 KIFAP3Q92845 792 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 RUSC1Q9BVN2 902 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 POLR3FQ9H1D9 316 aaPredicted RBP17.19■□□□□ 0.34
SS18-216ENST00000580751 IL23AQ9NPF7 189 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 GINS2Q9Y248 185 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 SQORQ9Y6N5 450 aa17.19■□□□□ 0.34
SS18-216ENST00000580751 POLR2DO15514 142 aaKnown RBP17.18■□□□□ 0.34
SS18-216ENST00000580751 GPR32O75388 356 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 CXCL10P02778 98 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 MYL1P05976 194 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 ARL2P36404 184 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 LAMTOR4Q0VGL1 99 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 TFDP1Q14186 410 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 DHX8Q14562 1220 aaKnown RBP17.18■□□□□ 0.34
SS18-216ENST00000580751 MCM6Q14566 821 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 E2F4Q16254 413 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 FBXO47Q5MNV8 452 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 RBM43Q6ZSC3 357 aaKnown RBP17.18■□□□□ 0.34
SS18-216ENST00000580751 SV2BQ7L1I2 683 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 MAEAQ7L5Y9 396 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 GPBP1Q86WP2 473 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 LRRC15Q8TF66 581 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 DHX58Q96C10 678 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 DRC1Q96MC2 740 aa17.18■□□□□ 0.34
SS18-216ENST00000580751 PPP1R16BQ96T49 567 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms