RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 SPATA31C1P0DKV0 1188 aa26.71■■□□□ 1.87
LIMD2-207ENST00000579329 PRPHP41219 470 aa26.71■■□□□ 1.87
LIMD2-207ENST00000579329 HAUS3Q68CZ6 603 aa26.71■■□□□ 1.87
LIMD2-207ENST00000579329 FAM228AQ86W67 206 aa26.71■■□□□ 1.87
LIMD2-207ENST00000579329 CATSPER3Q86XQ3 398 aa26.71■■□□□ 1.87
LIMD2-207ENST00000579329 NLRP7Q8WX94 980 aa26.71■■□□□ 1.87
LIMD2-207ENST00000579329 LINC01599Q8WXQ3 324 aa26.71■■□□□ 1.87
LIMD2-207ENST00000579329 ST3GAL5Q9UNP4 418 aa26.71■■□□□ 1.87
LIMD2-207ENST00000579329 ARID2Q68CP9 1835 aa26.71■■□□□ 1.87
LIMD2-207ENST00000579329 MED24O75448 989 aa26.7■■□□□ 1.86
LIMD2-207ENST00000579329 XRCC6P12956 609 aaKnown RBP eCLIP26.7■■□□□ 1.86
LIMD2-207ENST00000579329 EIF4BP23588 611 aaKnown RBP26.7■■□□□ 1.86
LIMD2-207ENST00000579329 HTRA4P83105 476 aaPredicted RBP26.7■■□□□ 1.86
LIMD2-207ENST00000579329 TAP1Q03518 808 aa26.7■■□□□ 1.86
LIMD2-207ENST00000579329 EMC2Q15006 297 aa26.7■■□□□ 1.86
LIMD2-207ENST00000579329 ZNF668Q96K58 619 aaPredicted RBP26.7■■□□□ 1.86
LIMD2-207ENST00000579329 TSPYL2Q9H2G4 693 aaPredicted RBP26.7■■□□□ 1.86
LIMD2-207ENST00000579329 TMX1Q9H3N1 280 aa26.7■■□□□ 1.86
LIMD2-207ENST00000579329 FOXD4L1Q9NU39 408 aa26.7■■□□□ 1.86
LIMD2-207ENST00000579329 LRWD1Q9UFC0 647 aa26.7■■□□□ 1.86
LIMD2-207ENST00000579329 STK24Q9Y6E0 443 aa26.7■■□□□ 1.86
LIMD2-207ENST00000579329 LCHNA4D1U4 455 aa26.69■■□□□ 1.86
LIMD2-207ENST00000579329 DARSP14868 501 aaKnown RBP26.69■■□□□ 1.86
LIMD2-207ENST00000579329 RPA1P27694 616 aa26.69■■□□□ 1.86
LIMD2-207ENST00000579329 PDIA5Q14554 519 aa26.69■■□□□ 1.86
LIMD2-207ENST00000579329 RTN4RL1Q86UN2 441 aaPredicted RBP26.69■■□□□ 1.86
LIMD2-207ENST00000579329 ZNF410Q86VK4 478 aa26.69■■□□□ 1.86
LIMD2-207ENST00000579329 RHPN2Q8IUC4 686 aa26.69■■□□□ 1.86
LIMD2-207ENST00000579329 TCP11Q8WWU5 503 aa26.69■■□□□ 1.86
LIMD2-207ENST00000579329 YME1L1Q96TA2 773 aa26.69■■□□□ 1.86
LIMD2-207ENST00000579329 GCOM2Q9BZD3 368 aaPredicted RBP26.69■■□□□ 1.86
LIMD2-207ENST00000579329 BMP2KQ9NSY1 1161 aaPredicted RBP26.69■■□□□ 1.86
LIMD2-207ENST00000579329 ARHGEF15O94989 841 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 SYT1P21579 422 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 MUTP22033 750 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 RARRES1P49788 294 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 ATP2C1P98194 919 aaPredicted RBP26.68■■□□□ 1.86
LIMD2-207ENST00000579329 DTHD1Q6ZMT9 781 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 IGSF22Q8N9C0 903 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 PIGOQ8TEQ8 1089 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 PSPC1Q8WXF1 523 aaKnown RBP26.68■■□□□ 1.86
LIMD2-207ENST00000579329 NACC1Q96RE7 527 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 MTRQ99707 1265 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 PRDM12Q9H4Q4 367 aa26.68■■□□□ 1.86
LIMD2-207ENST00000579329 DGAT1O75907 488 aa26.67■■□□□ 1.86
LIMD2-207ENST00000579329 CCT6AP40227 531 aaKnown RBP26.67■■□□□ 1.86
LIMD2-207ENST00000579329 TJAP1Q5JTD0 557 aa26.67■■□□□ 1.86
LIMD2-207ENST00000579329 FERMT3Q86UX7 667 aa26.67■■□□□ 1.86
LIMD2-207ENST00000579329 SP7Q8TDD2 431 aaPredicted RBP26.67■■□□□ 1.86
LIMD2-207ENST00000579329 TMEM143Q96AN5 459 aa26.67■■□□□ 1.86
LIMD2-207ENST00000579329 GAS2L1Q99501 681 aaPredicted RBP26.67■■□□□ 1.86
LIMD2-207ENST00000579329 ATP6V0A4Q9HBG4 840 aa26.67■■□□□ 1.86
LIMD2-207ENST00000579329 C1orf112Q9NSG2 853 aa26.67■■□□□ 1.86
LIMD2-207ENST00000579329 COL4A3BPQ9Y5P4 624 aa26.67■■□□□ 1.86
LIMD2-207ENST00000579329 A0A087WZ62 844 aa26.66■■□□□ 1.86
LIMD2-207ENST00000579329 DENND3A2RUS2 1198 aa26.66■■□□□ 1.86
LIMD2-207ENST00000579329 POTEGQ6S5H5 508 aa26.66■■□□□ 1.86
LIMD2-207ENST00000579329 NPAS4Q8IUM7 802 aa26.66■■□□□ 1.86
LIMD2-207ENST00000579329 NLRP4Q96MN2 994 aa26.66■■□□□ 1.86
LIMD2-207ENST00000579329 ADAM2Q99965 735 aa26.66■■□□□ 1.86
LIMD2-207ENST00000579329 FDXACB1Q9BRP7 624 aaPredicted RBP26.66■■□□□ 1.86
LIMD2-207ENST00000579329 INO80BQ9C086 356 aaPredicted RBP26.66■■□□□ 1.86
LIMD2-207ENST00000579329 DBR1Q9UK59 544 aaKnown RBP26.66■■□□□ 1.86
LIMD2-207ENST00000579329 COL4A6Q14031 1691 aa26.66■■□□□ 1.86
LIMD2-207ENST00000579329 NCOR1O75376 2440 aa26.65■■□□□ 1.86
LIMD2-207ENST00000579329 LINC01553A4QN01 128 aa26.65■■□□□ 1.86
LIMD2-207ENST00000579329 MGEA5O60502 916 aa26.65■■□□□ 1.86
LIMD2-207ENST00000579329 STAG3L1P0CL83 205 aa26.65■■□□□ 1.86
LIMD2-207ENST00000579329 SNX29Q8TEQ0 813 aa26.65■■□□□ 1.86
LIMD2-207ENST00000579329 XPNPEP1Q9NQW7 623 aa26.65■■□□□ 1.86
LIMD2-207ENST00000579329 RGS18Q9NS28 235 aa26.65■■□□□ 1.86
LIMD2-207ENST00000579329 TTC3P53804 2025 aa26.65■■□□□ 1.86
LIMD2-207ENST00000579329 A0A087WWV3 80 aa26.64■■□□□ 1.86
LIMD2-207ENST00000579329 ASAP2O43150 1006 aa26.64■■□□□ 1.86
LIMD2-207ENST00000579329 BMP15O95972 392 aa26.64■■□□□ 1.86
LIMD2-207ENST00000579329 SARSP49591 514 aaKnown RBP26.64■■□□□ 1.86
LIMD2-207ENST00000579329 IL17AQ16552 155 aa26.64■■□□□ 1.86
LIMD2-207ENST00000579329 ARL6IP4Q66PJ3 421 aaKnown RBP26.64■■□□□ 1.86
LIMD2-207ENST00000579329 KSR1Q8IVT5 923 aa26.64■■□□□ 1.86
LIMD2-207ENST00000579329 PRPF31Q8WWY3 499 aaKnown RBP26.64■■□□□ 1.86
LIMD2-207ENST00000579329 TGS1Q96RS0 853 aaKnown RBP26.64■■□□□ 1.86
LIMD2-207ENST00000579329 CERS4Q9HA82 394 aa26.64■■□□□ 1.86
LIMD2-207ENST00000579329 RNF216Q9NWF9 866 aaPredicted RBP26.64■■□□□ 1.86
LIMD2-207ENST00000579329 CHD9Q3L8U1 2897 aa26.63■■□□□ 1.85
LIMD2-207ENST00000579329 USO1O60763 962 aaKnown RBP26.63■■□□□ 1.85
LIMD2-207ENST00000579329 HSP90AA1P07900 732 aaKnown RBP26.63■■□□□ 1.85
LIMD2-207ENST00000579329 SFPQP23246 707 aaKnown RBP eCLIP26.63■■□□□ 1.85
LIMD2-207ENST00000579329 LAMTOR4Q0VGL1 99 aa26.63■■□□□ 1.85
LIMD2-207ENST00000579329 DSC3Q14574 896 aa26.63■■□□□ 1.85
LIMD2-207ENST00000579329 KRT79Q5XKE5 535 aa26.63■■□□□ 1.85
LIMD2-207ENST00000579329 SLC24A5Q71RS6 500 aa26.63■■□□□ 1.85
LIMD2-207ENST00000579329 ARNTL2Q8WYA1 636 aa26.63■■□□□ 1.85
LIMD2-207ENST00000579329 LRFN2Q9ULH4 789 aa26.63■■□□□ 1.85
LIMD2-207ENST00000579329 C9IYK1 514 aa26.62■■□□□ 1.85
LIMD2-207ENST00000579329 ZSCAN20P17040 1043 aaPredicted RBP26.62■■□□□ 1.85
LIMD2-207ENST00000579329 FGFR4P22455 802 aa26.62■■□□□ 1.85
LIMD2-207ENST00000579329 ERVK-21P61565 698 aa26.62■■□□□ 1.85
LIMD2-207ENST00000579329 RESTQ13127 1097 aa26.62■■□□□ 1.85
LIMD2-207ENST00000579329 MXD4Q14582 209 aaPredicted RBP26.62■■□□□ 1.85
LIMD2-207ENST00000579329 CRIPAKQ8N1N5 446 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms