RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 STK24Q9Y6E0 443 aa16.14■□□□□ 0.17
MKS1-207ENST00000578789 ARHGEF15O94989 841 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 DARSP14868 501 aaKnown RBP16.13■□□□□ 0.17
MKS1-207ENST00000578789 EIF4BP23588 611 aaKnown RBP16.13■□□□□ 0.17
MKS1-207ENST00000578789 RESTQ13127 1097 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 GRIN2CQ14957 1233 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 IL17AQ16552 155 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 RTN4RL1Q86UN2 441 aaPredicted RBP16.13■□□□□ 0.17
MKS1-207ENST00000578789 ZNF410Q86VK4 478 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 SP7Q8TDD2 431 aaPredicted RBP16.13■□□□□ 0.17
MKS1-207ENST00000578789 CDX2Q99626 313 aaPredicted RBP16.13■□□□□ 0.17
MKS1-207ENST00000578789 MTRQ99707 1265 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 ZBED2Q9BTP6 218 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 XPNPEP1Q9NQW7 623 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 SUCLA2Q9P2R7 463 aaPredicted RBP16.13■□□□□ 0.17
MKS1-207ENST00000578789 LRWD1Q9UFC0 647 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 DBR1Q9UK59 544 aaKnown RBP16.13■□□□□ 0.17
MKS1-207ENST00000578789 ST3GAL5Q9UNP4 418 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 MTMR6Q9Y217 621 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 INSL6Q9Y581 213 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 CHD9Q3L8U1 2897 aa16.13■□□□□ 0.17
MKS1-207ENST00000578789 COL4A4P53420 1690 aaPredicted RBP16.12■□□□□ 0.17
MKS1-207ENST00000578789 LCHNA4D1U4 455 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 MGEA5O60502 916 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 DGAT1O75907 488 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 BMP15O95972 392 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 TAP1Q03518 808 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 NFX1Q12986 1120 aaKnown RBP16.12■□□□□ 0.17
MKS1-207ENST00000578789 ARL6IP4Q66PJ3 421 aaKnown RBP16.12■□□□□ 0.17
MKS1-207ENST00000578789 POTEGQ6S5H5 508 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 DTHD1Q6ZMT9 781 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 FERMT3Q86UX7 667 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 CRIPAKQ8N1N5 446 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 TCP11Q8WWU5 503 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 NLRP7Q8WX94 980 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 PSPC1Q8WXF1 523 aaKnown RBP16.12■□□□□ 0.17
MKS1-207ENST00000578789 RC3H2Q9HBD1 1191 aaKnown RBP16.12■□□□□ 0.17
MKS1-207ENST00000578789 ATP6V0A4Q9HBG4 840 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 STXBP5LQ9Y2K9 1186 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 COL4A3BPQ9Y5P4 624 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 RALGAPA2Q2PPJ7 1873 aa16.12■□□□□ 0.17
MKS1-207ENST00000578789 A0A087WZ62 844 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 DSC3Q14574 896 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 FAM117BQ6P1L5 589 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 RHPN2Q8IUC4 686 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 SNX29Q8TEQ0 813 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 PIGOQ8TEQ8 1089 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 TMEM143Q96AN5 459 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 ZNF668Q96K58 619 aaPredicted RBP16.11■□□□□ 0.17
MKS1-207ENST00000578789 CCDC43Q96MW1 224 aaKnown RBP16.11■□□□□ 0.17
MKS1-207ENST00000578789 SCLT1Q96NL6 688 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 NACC1Q96RE7 527 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 FDXACB1Q9BRP7 624 aaPredicted RBP16.11■□□□□ 0.17
MKS1-207ENST00000578789 GCOM2Q9BZD3 368 aaPredicted RBP16.11■□□□□ 0.17
MKS1-207ENST00000578789 RGS18Q9NS28 235 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 C1orf112Q9NSG2 853 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 BMP2KQ9NSY1 1161 aaPredicted RBP16.11■□□□□ 0.17
MKS1-207ENST00000578789 NLRC5Q86WI3 1866 aa16.11■□□□□ 0.17
MKS1-207ENST00000578789 ASAP2O43150 1006 aa16.1■□□□□ 0.17
MKS1-207ENST00000578789 STX6O43752 255 aa16.1■□□□□ 0.17
MKS1-207ENST00000578789 CCT6AP40227 531 aaKnown RBP16.1■□□□□ 0.17
MKS1-207ENST00000578789 SARSP49591 514 aaKnown RBP16.1■□□□□ 0.17
MKS1-207ENST00000578789 ECM1Q16610 540 aa16.1■□□□□ 0.17
MKS1-207ENST00000578789 NPAS4Q8IUM7 802 aa16.1■□□□□ 0.17
MKS1-207ENST00000578789 IFT122Q9HBG6 1241 aa16.1■□□□□ 0.17
MKS1-207ENST00000578789 LINC01553A4QN01 128 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 PP2D1A8MPX8 630 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 C9IYK1 514 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 UPP2O95045 317 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 ARL2P36404 184 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 LAMTOR4Q0VGL1 99 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 HYIQ5T013 277 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 KRT79Q5XKE5 535 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 KSR1Q8IVT5 923 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 PRPF31Q8WWY3 499 aaKnown RBP16.09■□□□□ 0.17
MKS1-207ENST00000578789 MYLIPQ8WY64 445 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 ZNF689Q96CS4 500 aaPredicted RBP16.09■□□□□ 0.17
MKS1-207ENST00000578789 NLRP4Q96MN2 994 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 YME1L1Q96TA2 773 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 ADAM2Q99965 735 aa16.09■□□□□ 0.17
MKS1-207ENST00000578789 MMTAG2Q9BU76 263 aaKnown RBP16.09■□□□□ 0.17
MKS1-207ENST00000578789 INO80BQ9C086 356 aaPredicted RBP16.09■□□□□ 0.17
MKS1-207ENST00000578789 KIAA1671Q9BY89 1806 aa16.08■□□□□ 0.17
MKS1-207ENST00000578789 FNDC1Q4ZHG4 1894 aaPredicted RBP16.08■□□□□ 0.17
MKS1-207ENST00000578789 A0A087WWV3 80 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 DENND3A2RUS2 1198 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 VWA3AA6NCI4 1184 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 USO1O60763 962 aaKnown RBP16.08■□□□□ 0.16
MKS1-207ENST00000578789 DGKIO75912 1065 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 STAG3L1P0CL83 205 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 PDIA4P13667 645 aaKnown RBP16.08■□□□□ 0.16
MKS1-207ENST00000578789 SFPQP23246 707 aaKnown RBP eCLIP16.08■□□□□ 0.16
MKS1-207ENST00000578789 ERVK-21P61565 698 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 MXD4Q14582 209 aaPredicted RBP16.08■□□□□ 0.16
MKS1-207ENST00000578789 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.16
MKS1-207ENST00000578789 SLC24A5Q71RS6 500 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 SPRED2Q7Z698 418 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 SRGAP1Q7Z6B7 1085 aa16.08■□□□□ 0.16
MKS1-207ENST00000578789 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms