RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 NUP62CLQ9H1M0 184 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 CLSTN2Q9H4D0 955 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 KCND2Q9NZV8 630 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 SUCLA2Q9P2R7 463 aaPredicted RBP13.46□□□□□ -0.25
IFT20-207ENST00000578547 HOOK1Q9UJC3 728 aaKnown RBP13.46□□□□□ -0.25
IFT20-207ENST00000578547 AKT3Q9Y243 479 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 PCDHA2Q9Y5H9 948 aa13.46□□□□□ -0.25
IFT20-207ENST00000578547 MROH7Q68CQ1 1323 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 IGKV6-21A0A0C4DH24 114 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
IFT20-207ENST00000578547 GAS2O43903 313 aaKnown RBP13.45□□□□□ -0.26
IFT20-207ENST00000578547 FAM13AO94988 1023 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 VTNP04004 478 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 RGS19P49795 217 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 TMEM62Q0P6H9 643 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 FAAP100Q0VG06 881 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 MKRN4PQ13434 485 aaPredicted RBP13.45□□□□□ -0.26
IFT20-207ENST00000578547 GIT2Q14161 759 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 SH3RF1Q7Z6J0 888 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 SERINC5Q86VE9 423 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 DNAJB3Q8WWF6 145 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 TCP11Q8WWU5 503 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
IFT20-207ENST00000578547 WNT8BQ93098 351 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 ZNF668Q96K58 619 aaPredicted RBP13.45□□□□□ -0.26
IFT20-207ENST00000578547 DRC1Q96MC2 740 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 SCLT1Q96NL6 688 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 C7orf25Q9BPX7 421 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 HTATIP2Q9BUP3 242 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 TIPINQ9BVW5 301 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 PDLIM7Q9NR12 457 aa13.45□□□□□ -0.26
IFT20-207ENST00000578547 DNAH12Q6ZR08 3092 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 SMIM35A0A1B0GVV1 85 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 SFI1A8K8P3 1242 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 CTSHP09668 335 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 MAPK7Q13164 816 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 PTK7Q13308 1070 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 IER5Q5VY09 327 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 CAVIN1Q6NZI2 390 aaKnown RBP13.44□□□□□ -0.26
IFT20-207ENST00000578547 TAF2Q6P1X5 1199 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 RHPN2Q8IUC4 686 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 KSR1Q8IVT5 923 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 KIAA0319LQ8IZA0 1049 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 DAW1Q8N136 415 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 LINC01465Q8N7H1 131 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 ASAP3Q8TDY4 903 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 PRPF31Q8WWY3 499 aaKnown RBP13.44□□□□□ -0.26
IFT20-207ENST00000578547 DHX38Q92620 1227 aaKnown RBP13.44□□□□□ -0.26
IFT20-207ENST00000578547 DPF3Q92784 378 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 KIFAP3Q92845 792 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 DNAJC19Q96DA6 116 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 NLRP4Q96MN2 994 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 PANK4Q9NVE7 773 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 ODF2LQ9ULJ1 636 aa13.44□□□□□ -0.26
IFT20-207ENST00000578547 TRIP12Q14669 1992 aaPredicted RBP13.43□□□□□ -0.26
IFT20-207ENST00000578547 TRIM43BA6NCK2 446 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 RPN1P04843 607 aaKnown RBP13.43□□□□□ -0.26
IFT20-207ENST00000578547 CLTBP09497 229 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 ARL2P36404 184 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 THPOP40225 353 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 LAMTOR4Q0VGL1 99 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 DPYDQ12882 1025 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 TRIM71Q2Q1W2 868 aaKnown RBP13.43□□□□□ -0.26
IFT20-207ENST00000578547 KLHL40Q2TBA0 621 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 RSPH3Q86UC2 560 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 SFR1Q86XK3 245 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 CCDC65Q8IXS2 484 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 C7orf61Q8IZ16 206 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 MYCT1Q8N699 235 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 TRIM43Q96BQ3 446 aaPredicted RBP13.43□□□□□ -0.26
IFT20-207ENST00000578547 IFT74Q96LB3 600 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 PARVGQ9HBI0 331 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 PRDM5Q9NQX1 630 aaPredicted RBP13.43□□□□□ -0.26
IFT20-207ENST00000578547 GINS2Q9Y248 185 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 COL4A3BPQ9Y5P4 624 aa13.43□□□□□ -0.26
IFT20-207ENST00000578547 EVPLQ92817 2033 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 LRRIQ4A6NIV6 560 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 CCDC169A6NNP5 214 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 M0QZ92 97 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 TRAK2O60296 914 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 EVI5O60447 810 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 SMC2O95347 1197 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 MYL1P05976 194 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 SRGAP2CP0DJJ0 459 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 GLRA2P23416 452 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 PEX3P56589 373 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 NLRP11P59045 1033 aaKnown RBP13.42□□□□□ -0.26
IFT20-207ENST00000578547 MDM2Q00987 491 aaPredicted RBP13.42□□□□□ -0.26
IFT20-207ENST00000578547 COASYQ13057 564 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 DMP1Q13316 513 aaPredicted RBP13.42□□□□□ -0.26
IFT20-207ENST00000578547 CAPSQ13938 189 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 KIZQ2M2Z5 673 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 SKOR2Q2VWA4 1001 aaPredicted RBP13.42□□□□□ -0.26
IFT20-207ENST00000578547 HERC4Q5GLZ8 1057 aaPredicted RBP13.42□□□□□ -0.26
IFT20-207ENST00000578547 ODR4Q5SWX8 454 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 CCDC183Q5T5S1 534 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 CCDC155Q8N6L0 562 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 NLRP7Q8WX94 980 aa13.42□□□□□ -0.26
IFT20-207ENST00000578547 HPS3Q969F9 1004 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms