RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 NT5DC1Q5TFE4 455 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 SYDE2Q5VT97 1194 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 TRIM68Q6AZZ1 485 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 PLEKHH3Q7Z736 793 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 RALYLQ86SE5 291 aaKnown RBP3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 KBTBD2Q8IY47 623 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 LGI4Q8N135 537 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 CNTD1Q8N815 330 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 CDYL2Q8N8U2 506 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 LMBR1Q8WVP7 490 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 MBD6Q96DN6 1003 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 DYDC2Q96IM9 177 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 HIST1H2AHQ96KK5 128 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 HIST1H2AJQ99878 128 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 NOL10Q9BSC4 688 aaKnown RBP3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 ANO3Q9BYT9 981 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 HAPLN2Q9GZV7 340 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 VTA1Q9NP79 307 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 TYW1Q9NV66 732 aaKnown RBP3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 C14orf119Q9NWQ9 140 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 CDC42EP3Q9UKI2 254 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 VWA7Q9Y334 891 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 ZDHHC9Q9Y397 364 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 PPP2R3BQ9Y5P8 575 aa3.04□□□□□ -1.92
PTP4A1-204ENST00000578299 WASHC2CQ9Y4E1 1318 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 NRP2O60462 931 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 H2AFYO75367 372 aaKnown RBP3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 CLEC2LP0C7M8 214 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 ENPP1P22413 925 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 XPAP23025 273 aaPredicted RBP3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 MEOX1P50221 254 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 EVA1CP58658 441 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 ITKQ08881 620 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 KLF1Q13351 362 aaPredicted RBP3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 MTMR1Q13613 665 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 FAM50AQ14320 339 aaKnown RBP3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 MAN2A1Q16706 1144 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 UGT8Q16880 541 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 ZNF827Q17R98 1081 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 ZNF568Q3ZCX4 644 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 CT83Q5H943 113 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 ZMAT1Q5H9K5 638 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 PITRM1Q5JRX3 1037 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 CCDC62Q6P9F0 684 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 KLHDC10Q6PID8 442 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 FRMD5Q7Z6J6 570 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 KRTAP19-1Q8IUB9 90 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 ANKRD13AQ8IZ07 590 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 RPUSD2Q8IZ73 545 aaKnown RBP3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 RTKN2Q8IZC4 609 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 BCL6BQ8N143 479 aaPredicted RBP3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 SYT8Q8NBV8 401 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 OR14C36Q8NHC7 312 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 FEZF2Q8TBJ5 459 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 GFM2Q969S9 779 aaKnown RBP3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 MTMR8Q96EF0 704 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 RAX2Q96IS3 184 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 WDR92Q96MX6 357 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 ORAI2Q96SN7 254 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 OSBPL6Q9BZF3 934 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 OR10A2Q9H208 303 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 ZCCHC4Q9H5U6 513 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 PARD6AQ9NPB6 346 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 POLR3BQ9NW08 1133 aaPredicted RBP3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 TMPRSS11EQ9UL52 423 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 USP18Q9UMW8 372 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 PCDHB6Q9Y5E3 794 aa3.03□□□□□ -1.92
PTP4A1-204ENST00000578299 KATNA1O75449 491 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 CFBP00751 764 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 ZNF888P0CJ79 500 aaPredicted RBP3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 MTHFD2P13995 350 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 GPR3P46089 330 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 MRE11P49959 708 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 STAT5BP51692 787 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 RRADP55042 308 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 ANTXR2P58335 489 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 MRPS9P82933 396 aaKnown RBP3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 EXOSC10Q01780 885 aaKnown RBP3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 PPARAQ07869 468 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 PCOLCEQ15113 449 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 SURF1Q15526 300 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 BRDTQ58F21 947 aaPredicted RBP3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 AGBL4Q5VU57 503 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 USP30Q70CQ3 517 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 LARP4Q71RC2 724 aaKnown RBP eCLIP3.02□□□□□ -1.931e-6■□□□□ 10.2
PTP4A1-204ENST00000578299 GPR155Q7Z3F1 870 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 FERMT3Q86UX7 667 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 AMOTL1Q8IY63 956 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 PPP1R14CQ8TAE6 165 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 GAB3Q8WWW8 586 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 LPPQ93052 612 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 NKD2Q969F2 451 aaPredicted RBP3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 EAF2Q96CJ1 260 aaPredicted RBP3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 CEP89Q96ST8 783 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 KRTAP9-2Q9BYQ4 174 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 TRIM8Q9BZR9 551 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 XYLT2Q9H1B5 865 aa3.02□□□□□ -1.93
PTP4A1-204ENST00000578299 KCTD10Q9H3F6 313 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms