RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 MAP7D2Q96T17 732 aa14.1□□□□□ -0.15
MKS1-206ENST00000577824 C17orf75Q9HAS0 396 aa14.1□□□□□ -0.15
MKS1-206ENST00000577824 TRIM43BA6NCK2 446 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 NR1I2O75469 434 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 ZNF202O95125 648 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 LIG1P18858 919 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 DNM2P50570 870 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 CDC42EP1Q00587 391 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 POU5F1BQ06416 359 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 MXD4Q14582 209 aaPredicted RBP14.09□□□□□ -0.15
MKS1-206ENST00000577824 KRBA2Q6ZNG9 492 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 ZNF410Q86VK4 478 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
MKS1-206ENST00000577824 CEP57L1Q8IYX8 460 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 DNAJB3Q8WWF6 145 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 DDX12PQ92771 950 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 TRIM43Q96BQ3 446 aaPredicted RBP14.09□□□□□ -0.15
MKS1-206ENST00000577824 DNAJC19Q96DA6 116 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 DRC1Q96MC2 740 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 REEP2Q9BRK0 252 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 NFKBIZQ9BYH8 718 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 PANK2Q9BZ23 570 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 TRIM9Q9C026 710 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 LRRC27Q9C0I9 530 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 HIPK3Q9H422 1215 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 SERTAD1Q9UHV2 236 aa14.09□□□□□ -0.15
MKS1-206ENST00000577824 RANBP2P49792 3224 aaKnown RBP14.08□□□□□ -0.16
MKS1-206ENST00000577824 MYMKA6NI61 221 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 ASAP2O43150 1006 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 HIP1RO75146 1068 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 GPR32O75388 356 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 PARNO95453 639 aaKnown RBP14.08□□□□□ -0.16
MKS1-206ENST00000577824 MCM4P33991 863 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 NAMPTP43490 491 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 GPC3P51654 580 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 MRPS6P82932 125 aaKnown RBP14.08□□□□□ -0.16
MKS1-206ENST00000577824 AMPD3Q01432 767 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 CAPSQ13938 189 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 GIT2Q14161 759 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 CDCA2Q69YH5 1023 aaPredicted RBP14.08□□□□□ -0.16
MKS1-206ENST00000577824 METTL13Q8N6R0 699 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 TMEM143Q96AN5 459 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 C7orf25Q9BPX7 421 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 POLR3FQ9H1D9 316 aaPredicted RBP14.08□□□□□ -0.16
MKS1-206ENST00000577824 WNT8AQ9H1J5 351 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 ADAMTS10Q9H324 1103 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 GPRC5CQ9NQ84 441 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 BMP2KQ9NSY1 1161 aaPredicted RBP14.08□□□□□ -0.16
MKS1-206ENST00000577824 TMEM39AQ9NV64 488 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
MKS1-206ENST00000577824 COL4A3BPQ9Y5P4 624 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 TRPV2Q9Y5S1 764 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 SQORQ9Y6N5 450 aa14.08□□□□□ -0.16
MKS1-206ENST00000577824 EVI5O60447 810 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 TIMP1P01033 207 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 VTNP04004 478 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 SSBP05455 408 aaKnown RBP eCLIP14.07□□□□□ -0.16
MKS1-206ENST00000577824 SELPP16109 830 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 GLRA2P23416 452 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 LAMTOR4Q0VGL1 99 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 ZNF618Q5T7W0 954 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 FAM102BQ5T8I3 360 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 KANK3Q6NY19 840 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 LRRC8DQ7L1W4 858 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 CNNM3Q8NE01 707 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 ASAP3Q8TDY4 903 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 PRPF31Q8WWY3 499 aaKnown RBP14.07□□□□□ -0.16
MKS1-206ENST00000577824 PAGE5Q96GU1 130 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 FIZ1Q96SL8 496 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 FAM49AQ9H0Q0 323 aaPredicted RBP14.07□□□□□ -0.16
MKS1-206ENST00000577824 SUGCTQ9HAC7 445 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 AKT3Q9Y243 479 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 UMODL1Q5DID0 1318 aa14.07□□□□□ -0.16
MKS1-206ENST00000577824 RSPH10B2B2RC85 870 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 GTPBP6O43824 516 aaPredicted RBP14.06□□□□□ -0.16
MKS1-206ENST00000577824 CHRNA1P02708 482 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 RSPH10BP0C881 870 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 PLS3P13797 630 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 ITGB8P26012 769 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 RFC2P35250 354 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 THPOP40225 353 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 CRYBB1P53674 252 aaPredicted RBP14.06□□□□□ -0.16
MKS1-206ENST00000577824 MDM2Q00987 491 aaPredicted RBP14.06□□□□□ -0.16
MKS1-206ENST00000577824 EHHADHQ08426 723 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 MBTPS1Q14703 1052 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 PPP2R5AQ15172 486 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 FAM43BQ6ZT52 329 aaPredicted RBP14.06□□□□□ -0.16
MKS1-206ENST00000577824 C7orf61Q8IZ16 206 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 SPIRE2Q8WWL2 714 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 BSNDQ8WZ55 320 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 CCDC34Q96HJ3 373 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 NTPCRQ9BSD7 190 aaKnown RBP14.06□□□□□ -0.16
MKS1-206ENST00000577824 CELF4Q9BZC1 486 aaKnown RBP14.06□□□□□ -0.16
MKS1-206ENST00000577824 IFT122Q9HBG6 1241 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 PARVGQ9HBI0 331 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 OLFML3Q9NRN5 406 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 DACT1Q9NYF0 836 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 LARSQ9P2J5 1176 aaKnown RBP14.06□□□□□ -0.16
MKS1-206ENST00000577824 SEL1LQ9UBV2 794 aa14.06□□□□□ -0.16
MKS1-206ENST00000577824 CDY2AQ9Y6F7 541 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms