RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 DENND2AQ9ULE3 1009 aa7.14□□□□□ -1.27
SMCHD1-202ENST00000577300 UBA6A0AVT1 1052 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 CAPN14A8MX76 684 aa7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 TRAF5O00463 557 aa7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 DNAJC8O75937 253 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 CYP17A1P05093 508 aa7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 TGFB2P61812 414 aa7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 ATP2C1P98194 919 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 SAFB2Q14151 953 aaKnown RBP eCLIP7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 DGKDQ16760 1214 aa7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 SPTY2D1Q68D10 685 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 THEMISQ8N1K5 641 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 NKD2Q969F2 451 aaPredicted RBP7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 TMEM176AQ96HP8 235 aa7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 C16orf92Q96LL3 132 aa7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 CABP5Q9NP86 173 aa7.13□□□□□ -1.27
SMCHD1-202ENST00000577300 A0A1W2PRX2 142 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 PTPDC1A2A3K4 754 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 OPA1O60313 960 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 ANTXR2P58335 489 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 SQSTM1Q13501 440 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 TTC38Q5R3I4 469 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 SLFN12LQ6IEE8 588 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 NME9Q86XW9 330 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 TMPRSS6Q8IU80 811 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 DNAJC2Q99543 621 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 PCIF1Q9H4Z3 704 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 KCMF1Q9P0J7 381 aa7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 TNPO3Q9Y5L0 923 aaKnown RBP7.12□□□□□ -1.27
SMCHD1-202ENST00000577300 C2orf78A6NCI8 922 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 H7C1D1 291 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 ADAM8P78325 824 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 PURAQ00577 322 aaKnown RBP7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 TUBA3CQ13748 450 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 EPHA7Q15375 998 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 ZNF174Q15697 407 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 TUBA3EQ6PEY2 450 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 ANKRD35Q8N283 1001 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 KIAA1958Q8N8K9 716 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 GCDHQ92947 438 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 CEP72Q9P209 647 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 HECAQ9UBI9 543 aaPredicted RBP7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 B4GALT6Q9UBX8 382 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 MAGEL2Q9UJ55 1249 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 SH3BP1Q9Y3L3 701 aa7.11□□□□□ -1.27
SMCHD1-202ENST00000577300 STAT3P40763 770 aa7.1□□□□□ -1.27
SMCHD1-202ENST00000577300 RANGAP1P46060 587 aaPredicted RBP7.1□□□□□ -1.27
SMCHD1-202ENST00000577300 ZNF460Q14592 562 aa7.1□□□□□ -1.27
SMCHD1-202ENST00000577300 GAGE13Q4V321 117 aa7.1□□□□□ -1.27
SMCHD1-202ENST00000577300 BMP8AQ7Z5Y6 402 aa7.1□□□□□ -1.27
SMCHD1-202ENST00000577300 SREK1Q8WXA9 508 aaKnown RBP7.1□□□□□ -1.27
SMCHD1-202ENST00000577300 GPHA2Q96T91 129 aa7.1□□□□□ -1.27
SMCHD1-202ENST00000577300 HAPLN2Q9GZV7 340 aa7.1□□□□□ -1.27
SMCHD1-202ENST00000577300 RBM8AQ9Y5S9 174 aaKnown RBP7.1□□□□□ -1.27
SMCHD1-202ENST00000577300 CBX4O00257 560 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 FLT3P36888 993 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 BCAR1P56945 870 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 BPIFB4P59827 614 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 TCIRG1Q13488 830 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 RRP1BQ14684 758 aaKnown RBP7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 BMS1Q14692 1282 aaKnown RBP7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 PIK3R6Q5UE93 754 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 FNDC7Q5VTL7 733 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 UBE2R2Q712K3 238 aaPredicted RBP7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 ANKRD53Q8N9V6 530 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 TRIM8Q9BZR9 551 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 POLR3BQ9NW08 1133 aaPredicted RBP7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 PARPBPQ9NWS1 579 aa7.09□□□□□ -1.27
SMCHD1-202ENST00000577300 OVOL3O00110 214 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 RFPL3O75679 317 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 PEX11BO96011 259 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 DPTQ07507 201 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 ADCY1Q08828 1119 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 ACAP1Q15027 740 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 CRB2Q5IJ48 1285 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 PRAMEF9Q5VWM5 478 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 CLEC14AQ86T13 490 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 RPGRQ92834 1020 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 MIEF2Q96C03 454 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 MRFAP1L1Q96HT8 127 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 DYDC2Q96IM9 177 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 RPL10LQ96L21 214 aaKnown RBP7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 WDR92Q96MX6 357 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 TUBGCP5Q96RT8 1024 aa7.08□□□□□ -1.28
SMCHD1-202ENST00000577300 WDR33Q9C0J8 1336 aaKnown RBP7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 SDSP20132 328 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 PTX3P26022 381 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 CRHR2Q13324 411 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 MYBPC3Q14896 1274 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 CDCA2Q69YH5 1023 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 FAM111BQ6SJ93 734 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 GAREM2Q75VX8 874 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 PLA2G15Q8NCC3 412 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 SH3TC2Q8TF17 1288 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 ZNF483Q8TF39 744 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 CHFRQ96EP1 664 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 ORAI3Q9BRQ5 295 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 PITHD1Q9GZP4 211 aaPredicted RBP7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 TMEM260Q9NX78 707 aa7.07□□□□□ -1.28
SMCHD1-202ENST00000577300 JMJD7P0C870 316 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms