RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 ADAMTS10Q9H324 1103 aa17.37■□□□□ 0.37
SF3B3-215ENST00000577085 ZSWIM4Q9H7M6 989 aa17.37■□□□□ 0.37
SF3B3-215ENST00000577085 RC3H2Q9HBD1 1191 aaKnown RBP17.37■□□□□ 0.37
SF3B3-215ENST00000577085 ATP6V0A4Q9HBG4 840 aa17.37■□□□□ 0.37
SF3B3-215ENST00000577085 CYP26B1Q9NR63 512 aa17.37■□□□□ 0.37
SF3B3-215ENST00000577085 SUCLA2Q9P2R7 463 aaPredicted RBP17.37■□□□□ 0.37
SF3B3-215ENST00000577085 MRPL42Q9Y6G3 142 aaKnown RBP17.37■□□□□ 0.37
SF3B3-215ENST00000577085 EVPLQ92817 2033 aa17.37■□□□□ 0.37
SF3B3-215ENST00000577085 TBKBP1A7MCY6 615 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 MAFO75444 373 aaPredicted RBP17.36■□□□□ 0.37
SF3B3-215ENST00000577085 DARSP14868 501 aaKnown RBP17.36■□□□□ 0.37
SF3B3-215ENST00000577085 YWHABP31946 246 aaKnown RBP17.36■□□□□ 0.37
SF3B3-215ENST00000577085 TXKP42681 527 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 CYP4A11Q02928 519 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 RABEP1Q15276 862 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 EP400NLQ6ZTU2 488 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 TPH2Q8IWU9 490 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 ABI1Q8IZP0 508 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 NLRP4Q96MN2 994 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 INO80BQ9C086 356 aaPredicted RBP17.36■□□□□ 0.37
SF3B3-215ENST00000577085 TTC12Q9H892 705 aaPredicted RBP17.36■□□□□ 0.37
SF3B3-215ENST00000577085 AAASQ9NRG9 546 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 TMEM161AQ9NX61 479 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 PPME1Q9Y570 386 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 LOXHD1Q8IVV2 1947 aa17.36■□□□□ 0.37
SF3B3-215ENST00000577085 C9IYK1 514 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 HOXA2O43364 376 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 CSPG5O95196 566 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 STBD1O95210 358 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 SFPQP23246 707 aaKnown RBP eCLIP17.35■□□□□ 0.37
SF3B3-215ENST00000577085 RFC5P40937 340 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 RBM25P49756 843 aaKnown RBP17.35■□□□□ 0.37
SF3B3-215ENST00000577085 ST3GAL1Q11201 340 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 DRP2Q13474 957 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 CTTNQ14247 550 aaKnown RBP17.35■□□□□ 0.37
SF3B3-215ENST00000577085 C4orf19Q8IY42 314 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 CRIPAKQ8N1N5 446 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 RNF169Q8NCN4 708 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 DYDC2Q96IM9 177 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 UHRF1Q96T88 793 aaPredicted RBP17.35■□□□□ 0.37
SF3B3-215ENST00000577085 LMAN2LQ9H0V9 348 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 NSUN3Q9H649 340 aaKnown RBP17.35■□□□□ 0.37
SF3B3-215ENST00000577085 DACT1Q9NYF0 836 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 RGL1Q9NZL6 768 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 PCDHB12Q9Y5F1 795 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 VCANP13611 3396 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 RALGAPA2Q2PPJ7 1873 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 TTC3P53804 2025 aa17.35■□□□□ 0.37
SF3B3-215ENST00000577085 PRRC2BQ5JSZ5 2229 aaKnown RBP17.35■□□□□ 0.37
SF3B3-215ENST00000577085 IGKV6-21A0A0C4DH24 114 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 XIRP2A4UGR9 3374 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 MCM7P33993 719 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 GATMP50440 423 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 KCNQ1P51787 676 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 NPEPPSP55786 919 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 WDR81Q562E7 1941 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 NAALADL2Q58DX5 795 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 XKR9Q5GH70 373 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 ZNF410Q86VK4 478 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 NLRC5Q86WI3 1866 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 NEK9Q8TD19 979 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 PSPC1Q8WXF1 523 aaKnown RBP17.34■□□□□ 0.37
SF3B3-215ENST00000577085 ELAC1Q9H777 363 aaKnown RBP17.34■□□□□ 0.37
SF3B3-215ENST00000577085 KIF3AQ9Y496 699 aa17.34■□□□□ 0.37
SF3B3-215ENST00000577085 REV3LO60673 3130 aa17.33■□□□□ 0.37
SF3B3-215ENST00000577085 A0A087WZ62 844 aa17.33■□□□□ 0.36
SF3B3-215ENST00000577085 GRM6O15303 877 aa17.33■□□□□ 0.36
SF3B3-215ENST00000577085 GAS2O43903 313 aaKnown RBP17.33■□□□□ 0.36
SF3B3-215ENST00000577085 CSDE1O75534 798 aaKnown RBP17.33■□□□□ 0.36
SF3B3-215ENST00000577085 FGFR4P22455 802 aa17.33■□□□□ 0.36
SF3B3-215ENST00000577085 FAM102BQ5T8I3 360 aa17.33■□□□□ 0.36
SF3B3-215ENST00000577085 TCP11Q8WWU5 503 aa17.33■□□□□ 0.36
SF3B3-215ENST00000577085 P2RX5Q93086 422 aa17.33■□□□□ 0.36
SF3B3-215ENST00000577085 PPP2R3CQ969Q6 453 aa17.33■□□□□ 0.36
SF3B3-215ENST00000577085 KIF2CQ99661 725 aa17.33■□□□□ 0.36
SF3B3-215ENST00000577085 EIF2AK1Q9BQI3 630 aaKnown RBP17.33■□□□□ 0.36
SF3B3-215ENST00000577085 FDXACB1Q9BRP7 624 aaPredicted RBP17.33■□□□□ 0.36
SF3B3-215ENST00000577085 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.36
SF3B3-215ENST00000577085 UBE2ZQ9H832 354 aaPredicted RBP17.33■□□□□ 0.36
SF3B3-215ENST00000577085 ALG13Q9NP73 1137 aaKnown RBP17.33■□□□□ 0.36
SF3B3-215ENST00000577085 BMP2KQ9NSY1 1161 aaPredicted RBP17.33■□□□□ 0.36
SF3B3-215ENST00000577085 NOL7Q9UMY1 257 aaKnown RBP17.33■□□□□ 0.36
SF3B3-215ENST00000577085 COL4A3BPQ9Y5P4 624 aa17.33■□□□□ 0.36
SF3B3-215ENST00000577085 TNFRSF10AO00220 468 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 LINC00271P0C7V0 271 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 SRGAP2CP0DJJ0 459 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 FGFR1P11362 822 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 KCNA5P22460 613 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 FAM189BP81408 668 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 SPIRE1Q08AE8 756 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 DSC3Q14574 896 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 TCEAL5Q5H9L2 206 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 TWF2Q6IBS0 349 aaKnown RBP17.32■□□□□ 0.36
SF3B3-215ENST00000577085 CATSPER4Q7RTX7 472 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 KLHL23Q8NBE8 558 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 FBXO18Q8NFZ0 1043 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 TMEM143Q96AN5 459 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 CEP89Q96ST8 783 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 CHST12Q9NRB3 414 aa17.32■□□□□ 0.36
SF3B3-215ENST00000577085 WRAP73Q9P2S5 460 aaPredicted RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms