RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 RNF8O76064 485 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 FSBPO95073 299 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 GGPS1O95749 300 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 POLR2BP30876 1174 aaKnown RBP14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 ATP5OP48047 213 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 LIG4P49917 911 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 TMED1Q13445 227 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 TRAPPC3LQ5T215 181 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 PDIK1LQ8N165 341 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 TEX9Q8N6V9 391 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 OVOS2A0A0G2JMS6 1433 aa14.07□□□□□ -0.16
PCDHGB3-201ENST00000576222 CFAP69A5D8W1 941 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 SPECC1L-ADORA2AF8WAN1 911 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 TRPA1O75762 1119 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 TDP2O95551 362 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 SKOR1P84550 965 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 NTRK3Q16288 839 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 LONP2Q86WA8 852 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 ERP44Q9BS26 406 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 MYMKA6NI61 221 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 UCHL3P15374 230 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 BASP1P80723 227 aaKnown RBP14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 FRMD5Q7Z6J6 570 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 ANO3Q9BYT9 981 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 WNT8AQ9H1J5 351 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 KCNG1Q9UIX4 513 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 PCDHB4Q9Y5E5 795 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 ARFIP2P53365 341 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 SLC29A2Q14542 456 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 LONRF1Q17RB8 773 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 TTI2Q6NXR4 508 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 JAMLQ86YT9 394 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 CHURC1Q8WUH1 139 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 TTC1Q99614 292 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 NEXMIFQ5QGS0 1516 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 IQANK1A0A1B0GTG1 560 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 ACTN1P12814 892 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 ANXA13P27216 316 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 PRDX5P30044 214 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 SOX5P35711 763 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 MRPS35P82673 323 aaKnown RBP14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 ICA1Q05084 483 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 KRT81Q14533 505 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 CERKLQ49MI3 558 aaPredicted RBP14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 TBC1D9BQ66K14 1250 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 ZNF746Q6NUN9 644 aaPredicted RBP14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 ZNF564Q8TBZ8 553 aaPredicted RBP14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 TTC25Q96NG3 672 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 NBPF3Q9H094 633 aa14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 DDX20Q9UHI6 824 aaKnown RBP14.06□□□□□ -0.16
PCDHGB3-201ENST00000576222 PTPRUQ92729 1446 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 TMEM120BA0PK00 339 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 KRT19P08727 400 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 CRKLP46109 303 aaKnown RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 DYNLT1P63172 113 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 TRMT10CQ7L0Y3 403 aaKnown RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 SLC35G2Q8TBE7 412 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 PIP4K2CQ8TBX8 421 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 C1orf54Q8WWF1 131 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 ERP27Q96DN0 273 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 SNF8Q96H20 258 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 FAM161BQ96MY7 647 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 CDCA7Q9BWT1 371 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 KDM4CQ9H3R0 1056 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 ATP6V0A4Q9HBG4 840 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 GINM1Q9NU53 330 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 PFASO15067 1338 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 COPS2P61201 443 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 PDE1BQ01064 536 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 DMP1Q13316 513 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 SWT1Q5T5J6 900 aaKnown RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 ATG16L1Q676U5 607 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 NAIF1Q69YI7 327 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 METTL13Q8N6R0 699 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 HIPK4Q8NE63 616 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 SYN2Q92777 582 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 CCDC17Q96LX7 622 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 ERCC6L2Q5T890 1561 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 PITPNM2Q9BZ72 1349 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 MYCNP04198 464 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 NQO1P15559 274 aaKnown RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 TBC1D10BQ4KMP7 808 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 C1orf146Q5VVC0 180 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 SCYL2Q6P3W7 929 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 TMEM154Q6P9G4 183 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 TMED8Q6PL24 325 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 TTC16Q8NEE8 873 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 MORC4Q8TE76 937 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 DNAJC9Q8WXX5 260 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 ZNF512BQ96KM6 892 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 SUDS3Q9H7L9 328 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 ARHGAP20Q9P2F6 1191 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 UBAP1LF5GYI3 381 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 PHF2O75151 1096 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 CDH16O75309 829 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 COL9A3Q14050 684 aaPredicted RBP14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 SLC44A5Q8NCS7 719 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 WDR11Q9BZH6 1224 aa14.05□□□□□ -0.16
PCDHGB3-201ENST00000576222 MRPL11Q9Y3B7 192 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms