RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 FAM186AA6NE01 2351 aa11.34□□□□□ -0.59
CALCOCO2-227ENST00000575560 ZNF292O60281 2723 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 IGLV3-22A0A075B6J6 115 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 DDX39AO00148 427 aaKnown RBP11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 CXCL14O95715 111 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZSCAN20P17040 1043 aaPredicted RBP11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 EIF4BP23588 611 aaKnown RBP11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 MTHFRP42898 656 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 NAPAP54920 295 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 CLLU1OSQ5K130 101 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 PPP1R18Q6NYC8 613 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 MIS18BP1Q6P0N0 1132 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 METTL13Q8N6R0 699 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 LINC01465Q8N7H1 131 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 CRYGNQ8WXF5 182 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 LIMD1Q9UGP4 676 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 USTQ9Y2C2 406 aa11.33□□□□□ -0.6
CALCOCO2-227ENST00000575560 EVPLQ92817 2033 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 A0A0U1RQF3 1178 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 SMCO2A6NFE2 343 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 IPO5O00410 1097 aaKnown RBP11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 MAGEB2O15479 319 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 EOMESO95936 686 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 ASGR2P07307 311 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 CYP3A4P08684 503 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 WEE2P0C1S8 567 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZNF76P36508 570 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 ADCY7P51828 1080 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 NLRP11P59045 1033 aaKnown RBP11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 AP3B2Q13367 1082 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 KIAA1841Q6NSI8 718 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 ERMP1Q7Z2K6 904 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZNF598Q86UK7 904 aaKnown RBP11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 PLA2G4DQ86XP0 818 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 CKAP2LQ8IYA6 745 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 ABI1Q8IZP0 508 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZNF710Q8N1W2 664 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 PLCD3Q8N3E9 789 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 C12orf76Q8N812 135 aaPredicted RBP11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 LRRC2Q9BYS8 371 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 BARHL2Q9NY43 387 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 IRAK3Q9Y616 596 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 CNTNAP5Q8WYK1 1306 aa11.32□□□□□ -0.6
CALCOCO2-227ENST00000575560 GVINP1Q7Z2Y8 2422 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 SLC27A2O14975 620 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 ALDH7A1P49419 539 aaKnown RBP11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 CLCN3P51790 818 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 BCAR1P56945 870 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 NECTIN1Q15223 517 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 ATAT1Q5SQI0 421 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 RARS2Q5T160 578 aaKnown RBP11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZNF746Q6NUN9 644 aaPredicted RBP11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 EFCAB12Q6NXP0 572 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 KANK3Q6NY19 840 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 APOA5Q6Q788 366 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 FRMD5Q7Z6J6 570 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 MICU3Q86XE3 530 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 SLC22A17Q8WUG5 538 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 NKD2Q969F2 451 aaPredicted RBP11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 LSG1Q9H089 658 aaKnown RBP11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 GLT8D2Q9H1C3 349 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 TBC1D22BQ9NU19 505 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 CEP131Q9UPN4 1083 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 PCDHA10Q9Y5I2 948 aa11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 V9GY48 417 aaPredicted RBP11.31□□□□□ -0.6
CALCOCO2-227ENST00000575560 DNAH14Q0VDD8 3507 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 NT5C1B-RDH14C9J2C7 533 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 hCG_1984214I3L0E3 225 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 PI15O43692 258 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 PSAPP07602 524 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 NPR3P17342 541 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 TMOD1P28289 359 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 POLGP54098 1239 aaPredicted RBP11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 CWF19L1Q69YN2 538 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 MCTP2Q6DN12 878 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 TRMT1LQ7Z2T5 733 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 SMAP1Q8IYB5 467 aaPredicted RBP11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZNF713Q8N859 430 aaPredicted RBP11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 TDRD5Q8NAT2 981 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 RNF169Q8NCN4 708 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 FEZF2Q8TBJ5 459 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 HELQQ8TDG4 1101 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZNF577Q9BSK1 485 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZBP1Q9H171 429 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 MFSD1Q9H3U5 465 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 CYP26B1Q9NR63 512 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 DZANK1Q9NVP4 752 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 RBM28Q9NW13 759 aaKnown RBP11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 AKT3Q9Y243 479 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 CACNA1AO00555 2505 aa11.3□□□□□ -0.6
CALCOCO2-227ENST00000575560 ZNF862O60290 1169 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 CTSAP10619 480 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 DARSP14868 501 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 EPCAMP16422 314 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 ID4P47928 161 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 METAP2P50579 478 aaKnown RBP eCLIP11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 GPC3P51654 580 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 GIT2Q14161 759 aa11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 BMS1Q14692 1282 aaKnown RBP11.29□□□□□ -0.6
CALCOCO2-227ENST00000575560 JAKMIP3Q5VZ66 844 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms