RNA–Protein interactions for RNA: ENST00000575454.1

SMG6-218, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-218ENST00000575454 SLC39A11Q8N1S5 342 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 ZNF713Q8N859 430 aaPredicted RBP10.22□□□□□ -0.77
SMG6-218ENST00000575454 FANCBQ8NB91 859 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 FLCNQ8NFG4 579 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 MAP4K1Q92918 833 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 TMEM169Q96HH4 297 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 FAM167AQ96KS9 214 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 CYP26B1Q9NR63 512 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 DACT1Q9NYF0 836 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 HCSTQ9UBK5 93 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 MAFBQ9Y5Q3 323 aaPredicted RBP10.22□□□□□ -0.77
SMG6-218ENST00000575454 IRAK3Q9Y616 596 aa10.22□□□□□ -0.77
SMG6-218ENST00000575454 ZBTB42B2RXF5 422 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 SGSM2O43147 1006 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 CCNE2O96020 404 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 VTNP04004 478 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 PSAPP07602 524 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 AOC1P19801 751 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 CA8P35219 290 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 SREBF1P36956 1147 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 ADCY7P51828 1080 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 RARS2Q5T160 578 aaKnown RBP10.21□□□□□ -0.77
SMG6-218ENST00000575454 ZNF746Q6NUN9 644 aaPredicted RBP10.21□□□□□ -0.77
SMG6-218ENST00000575454 CABP7Q86V35 215 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 CCDC60Q8IWA6 550 aaPredicted RBP10.21□□□□□ -0.77
SMG6-218ENST00000575454 SMAP1Q8IYB5 467 aaPredicted RBP10.21□□□□□ -0.77
SMG6-218ENST00000575454 CCDC82Q8N4S0 544 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 RNF169Q8NCN4 708 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 ANO3Q9BYT9 981 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 RBM28Q9NW13 759 aaKnown RBP10.21□□□□□ -0.77
SMG6-218ENST00000575454 AKT3Q9Y243 479 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 TAF6LQ9Y6J9 622 aa10.21□□□□□ -0.77
SMG6-218ENST00000575454 CFAP47Q6ZTR5 3102 aa10.21□□□□□ -0.78
SMG6-218ENST00000575454 TTC3P53804 2025 aa10.21□□□□□ -0.78
SMG6-218ENST00000575454 CHD8Q9HCK8 2581 aa10.21□□□□□ -0.78
SMG6-218ENST00000575454 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.2□□□□□ -0.78
SMG6-218ENST00000575454 hCG_1642624A0A1W2PR95 340 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 DDX39AO00148 427 aaKnown RBP10.2□□□□□ -0.78
SMG6-218ENST00000575454 IPO5O00410 1097 aaKnown RBP10.2□□□□□ -0.78
SMG6-218ENST00000575454 ASGR2P07307 311 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 SKIP12755 728 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 PBX3P40426 434 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 BCAR1P56945 870 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 NLRP11P59045 1033 aaKnown RBP10.2□□□□□ -0.78
SMG6-218ENST00000575454 SETQ01105 290 aaPredicted RBP10.2□□□□□ -0.78
SMG6-218ENST00000575454 TDGQ13569 410 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 NONOQ15233 471 aaKnown RBP eCLIP10.2□□□□□ -0.78
SMG6-218ENST00000575454 KIAA1217Q5T5P2 1943 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 TTC22Q5TAA0 569 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 PLA2G4DQ86XP0 818 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 CCDC105Q8IYK2 499 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 VPS52Q8N1B4 723 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 KCNG4Q8TDN1 519 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 EMILIN2Q9BXX0 1053 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 ADAMTS10Q9H324 1103 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 CHST12Q9NRB3 414 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 NRBP2Q9NSY0 501 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 RNF19AQ9NV58 838 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 FBXL21Q9UKT6 434 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 PCDHA10Q9Y5I2 948 aa10.2□□□□□ -0.78
SMG6-218ENST00000575454 ACACBO00763 2458 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 RALGAPA2Q2PPJ7 1873 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 SMCO2A6NFE2 343 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 SPDYE4A6NLX3 237 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 DHX15O43143 795 aaKnown RBP10.19□□□□□ -0.78
SMG6-218ENST00000575454 LMNAP02545 664 aaKnown RBP10.19□□□□□ -0.78
SMG6-218ENST00000575454 CYP3A4P08684 503 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 CTSAP10619 480 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 DARSP14868 501 aaKnown RBP10.19□□□□□ -0.78
SMG6-218ENST00000575454 GSPT1P15170 499 aaKnown RBP10.19□□□□□ -0.78
SMG6-218ENST00000575454 RXRAP19793 462 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 ATP4AP20648 1035 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 ANGPT1Q15389 498 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 CLLU1OSQ5K130 101 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 WWC2Q6AWC2 1192 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 EFCAB12Q6NXP0 572 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 ELMSAN1Q6PJG2 1045 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 CCDC149Q6ZUS6 474 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 GPR149Q86SP6 731 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 DDX53Q86TM3 631 aaKnown RBP10.19□□□□□ -0.78
SMG6-218ENST00000575454 ZNF598Q86UK7 904 aaKnown RBP10.19□□□□□ -0.78
SMG6-218ENST00000575454 SGMS1Q86VZ5 419 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 C12orf76Q8N812 135 aaPredicted RBP10.19□□□□□ -0.78
SMG6-218ENST00000575454 DTWD2Q8NBA8 298 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 SCLT1Q96NL6 688 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 PPP1R16BQ96T49 567 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 ZNF577Q9BSK1 485 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 TRAIPQ9BWF2 469 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 ZBP1Q9H171 429 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 SFXN1Q9H9B4 322 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 BARHL2Q9NY43 387 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 IGSF9Q9P2J2 1179 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 DPP7Q9UHL4 492 aa10.19□□□□□ -0.78
SMG6-218ENST00000575454 RBM8AQ9Y5S9 174 aaKnown RBP10.19□□□□□ -0.78
SMG6-218ENST00000575454 BAHCC1Q9P281 2608 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 WDR64B1ANS9 1081 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 FAM86B1E9PN63 330 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 WEE2P0C1S8 567 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 FAM86B2P0C5J1 330 aa10.18□□□□□ -0.78
SMG6-218ENST00000575454 RFX1P22670 979 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms