RNA–Protein interactions for RNA: ENST00000575214.1

HCFC1R1-208, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2

Gene HCFC1R1, Length 1,365 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-208ENST00000575214 RPA1P27694 616 aa23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 POTEGQ6S5H5 508 aa23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 DTHD1Q6ZMT9 781 aa23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 TMEM143Q96AN5 459 aa23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 YME1L1Q96TA2 773 aa23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 MTRQ99707 1265 aa23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 TSPYL2Q9H2G4 693 aaPredicted RBP23.1■■□□□ 1.29
HCFC1R1-208ENST00000575214 DENND3A2RUS2 1198 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 ARHGEF15O94989 841 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 DARSP14868 501 aaKnown RBP23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 CCT6AP40227 531 aaKnown RBP23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 RARRES1P49788 294 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 ATP2C1P98194 919 aaPredicted RBP23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 TAP1Q03518 808 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 PDIA5Q14554 519 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 RTN4RL1Q86UN2 441 aaPredicted RBP23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 IGSF22Q8N9C0 903 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 TCP11Q8WWU5 503 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 PSPC1Q8WXF1 523 aaKnown RBP23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 NLRP4Q96MN2 994 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 GCOM2Q9BZD3 368 aaPredicted RBP23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 PRDM12Q9H4Q4 367 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 STXBP5LQ9Y2K9 1186 aa23.09■■□□□ 1.29
HCFC1R1-208ENST00000575214 A0A087WZ62 844 aa23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 XRCC6P12956 609 aaKnown RBP eCLIP23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 IBSPP21815 317 aaPredicted RBP23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 ZNF410Q86VK4 478 aa23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 KSR1Q8IVT5 923 aa23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 SNX29Q8TEQ0 813 aa23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 NACC1Q96RE7 527 aa23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 FDXACB1Q9BRP7 624 aaPredicted RBP23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 CERS4Q9HA82 394 aa23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 ATP6V0A4Q9HBG4 840 aa23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 COL4A3BPQ9Y5P4 624 aa23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 STK24Q9Y6E0 443 aa23.08■■□□□ 1.29
HCFC1R1-208ENST00000575214 COL6A3P12111 3177 aa23.08■■□□□ 1.28
HCFC1R1-208ENST00000575214 LOXHD1Q8IVV2 1947 aa23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 MGEA5O60502 916 aa23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 DGAT1O75907 488 aa23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 FOSL2P15408 326 aa23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 HTRA4P83105 476 aaPredicted RBP23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 IL17AQ16552 155 aa23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 FAM43BQ6ZT52 329 aaPredicted RBP23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 PRPF31Q8WWY3 499 aaKnown RBP23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 GAS2L1Q99501 681 aaPredicted RBP23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 ADAM2Q99965 735 aa23.07■■□□□ 1.28
HCFC1R1-208ENST00000575214 USO1O60763 962 aaKnown RBP23.06■■□□□ 1.28
HCFC1R1-208ENST00000575214 CSDE1O75534 798 aaKnown RBP23.06■■□□□ 1.28
HCFC1R1-208ENST00000575214 MUTP22033 750 aa23.06■■□□□ 1.28
HCFC1R1-208ENST00000575214 FGFR4P22455 802 aa23.06■■□□□ 1.28
HCFC1R1-208ENST00000575214 KRT79Q5XKE5 535 aa23.06■■□□□ 1.28
HCFC1R1-208ENST00000575214 INO80BQ9C086 356 aaPredicted RBP23.06■■□□□ 1.28
HCFC1R1-208ENST00000575214 XPNPEP1Q9NQW7 623 aa23.06■■□□□ 1.28
HCFC1R1-208ENST00000575214 DBR1Q9UK59 544 aaKnown RBP23.06■■□□□ 1.28
HCFC1R1-208ENST00000575214 LINC01553A4QN01 128 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 PP2D1A8MPX8 630 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 STX6O43752 255 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 LAMTOR4Q0VGL1 99 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 RESTQ13127 1097 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 ARL6IP4Q66PJ3 421 aaKnown RBP23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 NPAS4Q8IUM7 802 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 ARNTL2Q8WYA1 636 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 RGS18Q9NS28 235 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 C1orf112Q9NSG2 853 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 LRFN2Q9ULH4 789 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 MTMR6Q9Y217 621 aa23.05■■□□□ 1.28
HCFC1R1-208ENST00000575214 ARHGEF35A5YM69 484 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 VWA3AA6NCI4 1184 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 BMP15O95972 392 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 STAG3L1P0CL83 205 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 SRGAP2CP0DJJ0 459 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 ZSCAN20P17040 1043 aaPredicted RBP23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 SFPQP23246 707 aaKnown RBP eCLIP23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 CDC25AP30304 524 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 SARSP49591 514 aaKnown RBP23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 ECM1Q16610 540 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 SPRED2Q7Z698 418 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 SP7Q8TDD2 431 aaPredicted RBP23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 MTUS1Q9ULD2 1270 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 KIAA1024Q9UPX6 916 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 CDH23Q9H251 3354 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 ARID2Q68CP9 1835 aa23.04■■□□□ 1.28
HCFC1R1-208ENST00000575214 ASAP2O43150 1006 aa23.03■■□□□ 1.28
HCFC1R1-208ENST00000575214 DSC3Q14574 896 aa23.03■■□□□ 1.28
HCFC1R1-208ENST00000575214 SF3A1Q15459 793 aaKnown RBP23.03■■□□□ 1.28
HCFC1R1-208ENST00000575214 SLC24A5Q71RS6 500 aa23.03■■□□□ 1.28
HCFC1R1-208ENST00000575214 RNF149Q8NC42 400 aa23.03■■□□□ 1.28
HCFC1R1-208ENST00000575214 TGS1Q96RS0 853 aaKnown RBP23.03■■□□□ 1.28
HCFC1R1-208ENST00000575214 DDX19AQ9NUU7 478 aaKnown RBP23.03■■□□□ 1.28
HCFC1R1-208ENST00000575214 MXD4Q14582 209 aaPredicted RBP23.02■■□□□ 1.28
HCFC1R1-208ENST00000575214 MAEAQ7L5Y9 396 aa23.02■■□□□ 1.28
HCFC1R1-208ENST00000575214 IFT122Q9HBG6 1241 aa23.02■■□□□ 1.28
HCFC1R1-208ENST00000575214 RNF216Q9NWF9 866 aaPredicted RBP23.02■■□□□ 1.28
HCFC1R1-208ENST00000575214 PCDHB7Q9Y5E2 793 aa23.02■■□□□ 1.28
HCFC1R1-208ENST00000575214 ADGRA3Q8IWK6 1321 aa23.02■■□□□ 1.28
HCFC1R1-208ENST00000575214 CHD9Q3L8U1 2897 aa23.02■■□□□ 1.28
HCFC1R1-208ENST00000575214 EPOPA6NHQ4 379 aa23.01■■□□□ 1.27
HCFC1R1-208ENST00000575214 C9IYK1 514 aa23.01■■□□□ 1.27
HCFC1R1-208ENST00000575214 IGFBP4P22692 258 aa23.01■■□□□ 1.27
HCFC1R1-208ENST00000575214 TTC3P53804 2025 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms