RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	DPCR1	Q3MIW9	517 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	ANO6	Q4KMQ2	910 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	ODR4	Q5SWX8	454 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	EFCAB12	Q6NXP0	572 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	MTHFD1L	Q6UB35	978 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	STXBP4	Q6ZWJ1	553 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	SESTD1	Q86VW0	696 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	SFR1	Q86XK3	245 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	C7orf31	Q8N865	590 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	SPIRE2	Q8WWL2	714 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	KCNN1	Q92952	543 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	ZNF333	Q96JL9	665 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	IFT74	Q96LB3	600 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	BPIFA3	Q9BQP9	254 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	RNF208	Q9H0X6	261 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	ST6GALNAC4	Q9H4F1	302 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	OGDHL	Q9ULD0	1010 aa		13.16	□□□□□ -0.3
PRPF8-212	ENST00000575116	C17orf102	A2RUQ5	167 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	PPP1R3G	B7ZBB8	358 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	KBTBD13	C9JR72	458 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	PRCP	P42785	496 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	ACLY	P53396	1101 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	CDC42EP1	Q00587	391 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	POU5F1B	Q06416	359 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	DMP1	Q13316	513 aa	Predicted RBP	13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	MTFR1	Q15390	333 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	NBPF20	Q3BBV1	942 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	MARCH8	Q5T0T0	291 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	NFRKB	Q6P4R8	1299 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	CXCL17	Q6UXB2	119 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	MAEA	Q7L5Y9	396 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	ZNF720	Q7Z2F6	126 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	FAM178B	Q8IXR5	827 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	ADSSL1	Q8N142	457 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	ZNF710	Q8N1W2	664 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	GUF1	Q8N442	669 aa	Known RBP	13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	LINC01465	Q8N7H1	131 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	KIAA0895	Q8NCT3	520 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	TRAPPC12	Q8WVT3	735 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	FIZ1	Q96SL8	496 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	DNAJC25	Q9H1X3	360 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	MRPL44	Q9H9J2	332 aa	Known RBP	13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	SLC39A2	Q9NP94	309 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	SETD4	Q9NVD3	440 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	PHF24	Q9UPV7	400 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	GDA	Q9Y2T3	454 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	PCDHB13	Q9Y5F0	798 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	FRMPD3	Q5JV73	1810 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	KAT6A	Q92794	2004 aa		13.15	□□□□□ -0.3
PRPF8-212	ENST00000575116	MYH11	P35749	1972 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	SCN10A	Q9Y5Y9	1956 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	SMIM35	A0A1B0GVV1	85 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	DNM1L	O00429	736 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	PSMA7	O14818	248 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	EIF3D	O15371	548 aa	Known RBP eCLIP	13.14	□□□□□ -0.31	2e-7	■■■□□ 14.8
PRPF8-212	ENST00000575116	GJB1	P08034	283 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	NAMPT	P43490	491 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	NPTX2	P47972	431 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	ZNF165	P49910	485 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	NCKAP1L	P55160	1127 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	IGBP1	P78318	339 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	MKRN4P	Q13434	485 aa	Predicted RBP	13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	FOXR2	Q6PJQ5	311 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	MYOCD	Q8IZQ8	938 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	ZNF507	Q8TCN5	953 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	FAM200A	Q8TCP9	573 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	LMBR1	Q8WVP7	490 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	PSPC1	Q8WXF1	523 aa	Known RBP	13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	TMEM143	Q96AN5	459 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	HVCN1	Q96D96	273 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	GLT1D1	Q96MS3	346 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	DEFB118	Q96PH6	123 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	STRA6	Q9BX79	667 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	CRISPLD2	Q9H0B8	497 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	SUGCT	Q9HAC7	445 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	POLD4	Q9HCU8	107 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	GPRC5C	Q9NQ84	441 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	HDAC6	Q9UBN7	1215 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	GTF2IRD1	Q9UHL9	959 aa		13.14	□□□□□ -0.31
PRPF8-212	ENST00000575116	UBE4B	O95155	1302 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	PHLPP2	Q6ZVD8	1323 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	IKBKB	O14920	756 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	SGPL1	O95470	568 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	MYCN	P04198	464 aa	Predicted RBP	13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	RPLP2	P05387	115 aa	Known RBP	13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	CD44	P16070	742 aa	Known RBP	13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	GLRA2	P23416	452 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	PEX3	P56589	373 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	SOX10	P56693	466 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	GTF2B	Q00403	316 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	TFDP1	Q14186	410 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	BMT2	Q1RMZ1	405 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	HAUS6	Q7Z4H7	955 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	GAS2L3	Q86XJ1	694 aa		13.13	□□□□□ -0.31
PRPF8-212	ENST00000575116	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.13	□□□□□ -0.31

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