RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 CEP55Q53EZ4 464 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 EMC10Q5UCC4 262 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 MSL1Q68DK7 614 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 CCDC174Q6PII3 467 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 PEX26Q7Z412 305 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 KSR1Q8IVT5 923 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 HES6Q96HZ4 224 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 STRA6Q9BX79 667 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 EHMT1Q9H9B1 1298 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 GOPCQ9HD26 462 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 ZNF219Q9P2Y4 722 aaPredicted RBP9.74□□□□□ -0.85
NCBP3-204ENST00000574911 DNAJC12Q9UKB3 198 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 NOC2LQ9Y3T9 749 aaKnown RBP9.74□□□□□ -0.85
NCBP3-204ENST00000574911 A6NNZ2 444 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 CCDC188H7C350 402 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 PLA2G6O60733 806 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 TMEM253P0C7T8 217 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 ARP10275 920 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 GUCY2CP25092 1073 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 DRAP1Q14919 205 aaPredicted RBP9.74□□□□□ -0.85
NCBP3-204ENST00000574911 PPP2R5AQ15172 486 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 TUBB8Q3ZCM7 444 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 CBWD6Q4V339 395 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 CBWD3Q5JTY5 395 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 CBWD5Q5RIA9 395 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 STXBP4Q6ZWJ1 553 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 SLC9A9Q8IVB4 645 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 C10orf67Q8IYJ2 551 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 ZNF577Q9BSK1 485 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 WDR11Q9BZH6 1224 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 RASSF4Q9H2L5 321 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 MRPL11Q9Y3B7 192 aaKnown RBP9.74□□□□□ -0.85
NCBP3-204ENST00000574911 DAAM1Q9Y4D1 1078 aa9.74□□□□□ -0.85
NCBP3-204ENST00000574911 YDJCA8MPS7 323 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 KRT14P02533 472 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 HSPA1LP34931 641 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 CORO7P57737 925 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 UBXN2AP68543 259 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 DNAJC21Q5F1R6 531 aaKnown RBP9.73□□□□□ -0.85
NCBP3-204ENST00000574911 KDM7AQ6ZMT4 941 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 HS2ST1Q7LGA3 356 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 FAM178BQ8IXR5 827 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 ZFP91Q96JP5 570 aaPredicted RBP9.73□□□□□ -0.85
NCBP3-204ENST00000574911 AP1M1Q9BXS5 423 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 INTS2Q9H0H0 1204 aaKnown RBP9.73□□□□□ -0.85
NCBP3-204ENST00000574911 ZBTB21Q9ULJ3 1066 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 FRMD4BQ9Y2L6 1034 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 TMCO5BA8MYB1 307 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 PPP1R37O75864 691 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 CYP2J2P51589 502 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 SETQ01105 290 aaPredicted RBP9.73□□□□□ -0.85
NCBP3-204ENST00000574911 PPATQ06203 517 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 MAPK7Q13164 816 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 MYBPC2Q14324 1141 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 PTPROQ16827 1216 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 LRIG3Q6UXM1 1119 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 SH2D3CQ8N5H7 860 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 CHURC1Q8WUH1 139 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 TEKT3Q9BXF9 490 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 DEFB129Q9H1M3 183 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 TMEM51Q9NW97 253 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 AMFRQ9UKV5 643 aa9.73□□□□□ -0.85
NCBP3-204ENST00000574911 TTC7AQ9ULT0 858 aaPredicted RBP9.73□□□□□ -0.85
NCBP3-204ENST00000574911 TCP10L2B9ZVM9 353 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 KRIT1O00522 736 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 SART1O43290 800 aaKnown RBP9.72□□□□□ -0.85
NCBP3-204ENST00000574911 TRIM49P0CI25 452 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 TRIM49CP0CI26 452 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 CHRNA5P30532 468 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 ODR4Q5SWX8 454 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 KCTD16Q68DU8 428 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 DAAM2Q86T65 1068 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 FMNL3Q8IVF7 1028 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 GLYCTKQ8IVS8 523 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 DAW1Q8N136 415 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 FAM151AQ8WW52 585 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 CNKSR1Q969H4 720 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 SLITRK6Q9H5Y7 841 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 VCPKMTQ9H867 229 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 APEX2Q9UBZ4 518 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 CNTNAP1P78357 1384 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 SPDYE2BA6NHP3 402 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 DDX3YO15523 660 aaKnown RBP9.72□□□□□ -0.85
NCBP3-204ENST00000574911 HIP1RO75146 1068 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 SPDYE6P0CI01 402 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 ITGA4P13612 1032 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 MYL7Q01449 175 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 KIF22Q14807 665 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 FAM160B2Q86V87 743 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 BANK1Q8NDB2 785 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 LMO3Q8TAP4 145 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 SLC35G2Q8TBE7 412 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 TMEM174Q8WUU8 243 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 RFFLQ8WZ73 363 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 MXRA8Q9BRK3 442 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 LXNQ9BS40 222 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 DDX47Q9H0S4 455 aaKnown RBP9.72□□□□□ -0.85
NCBP3-204ENST00000574911 NEUROG2Q9H2A3 272 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 OSGEPQ9NPF4 335 aa9.72□□□□□ -0.85
NCBP3-204ENST00000574911 PLAAQ9Y263 795 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms