RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 PALM3A6NDB9 673 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-212ENST00000574799 PPEF1O14829 653 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-212ENST00000574799 SERPING1P05155 500 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 COPS2P61201 443 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 ITIH4Q14624 930 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 SV2BQ7L1I2 683 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 PPFIBP2Q8ND30 876 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 C7orf43Q8WVR3 580 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.36□□□□□ -0.75
CCDC40-212ENST00000574799 RPGRQ92834 1020 aaKnown RBP10.36□□□□□ -0.75
CCDC40-212ENST00000574799 NUDCD1Q96RS6 583 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 NKIRAS1Q9NYS0 192 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 GGA1Q9UJY5 639 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 RASGRF2O14827 1237 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 SCG2P13521 617 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 FLT3P36888 993 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 PDXDC1Q6P996 788 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 ZNF804AQ7Z570 1209 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 DZIP1Q86YF9 867 aaKnown RBP10.36□□□□□ -0.75
CCDC40-212ENST00000574799 ZFPM1Q8IX07 1006 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 NELFCDQ8IXH7 590 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 TSPY2A6NKD2 308 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 TMEM110-MUSTN1A8MSY1 372 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 FGGP02679 453 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 SHBGP04278 402 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 SETSIPP0DME0 302 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 CALM1P0DP23 149 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 CALM2P0DP24 149 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 CALM3P0DP25 149 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 MRPS35P82673 323 aaKnown RBP10.36□□□□□ -0.75
CCDC40-212ENST00000574799 CDK17Q00537 523 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 GRM4Q14833 912 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 PPP2R5BQ15173 497 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 ERMARDQ5T6L9 678 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 BLIDQ8IZY5 108 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 GIMAP8Q8ND71 665 aaPredicted RBP10.36□□□□□ -0.75
CCDC40-212ENST00000574799 TMEM47Q9BQJ4 181 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 PACSIN1Q9BY11 444 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 USH1CQ9Y6N9 552 aa10.36□□□□□ -0.75
CCDC40-212ENST00000574799 A0A1W2PQJ5 194 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 CCDC188H7C350 402 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 KRT16P08779 473 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 PMS2P54278 862 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 BLMHQ13867 455 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 FAM83BQ5T0W9 1011 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 FAM47EQ6ZV65 393 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 MFN1Q8IWA4 741 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 FGD4Q96M96 766 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 C2CD2Q9Y426 696 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 DPPA5A6NC42 116 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 ABCB4P21439 1286 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 TECP42680 631 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 TRAPPC10P48553 1259 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 RAB27AP51159 221 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 ZNF131P52739 623 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 ROR2Q01974 943 aaKnown RBP10.35□□□□□ -0.75
CCDC40-212ENST00000574799 MFSD14BQ5SR56 506 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 ZC3H18Q86VM9 953 aaKnown RBP10.35□□□□□ -0.75
CCDC40-212ENST00000574799 DGKHQ86XP1 1220 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 DNAAF5Q86Y56 855 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 TEX9Q8N6V9 391 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 DUSP9Q99956 384 aaKnown RBP10.35□□□□□ -0.75
CCDC40-212ENST00000574799 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.35□□□□□ -0.75
CCDC40-212ENST00000574799 DBR1Q9UK59 544 aaKnown RBP10.35□□□□□ -0.75
CCDC40-212ENST00000574799 AMFRQ9UKV5 643 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 TRIM33Q9UPN9 1127 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 MYH10P35580 1976 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 F8VZ95 297 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 RHOBTB3O94955 611 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 PYGLP06737 847 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 TXKP42681 527 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 CDK8P49336 464 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 RIPK1Q13546 671 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 SEPT7Q16181 437 aaKnown RBP10.35□□□□□ -0.75
CCDC40-212ENST00000574799 UAP1Q16222 522 aaPredicted RBP10.35□□□□□ -0.75
CCDC40-212ENST00000574799 APOBEC3HQ6NTF7 200 aaKnown RBP10.35□□□□□ -0.75
CCDC40-212ENST00000574799 CLEC10AQ8IUN9 316 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 UBA5Q9GZZ9 404 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 RGL1Q9NZL6 768 aa10.35□□□□□ -0.75
CCDC40-212ENST00000574799 CCNT1O60563 726 aaKnown RBP10.34□□□□□ -0.75
CCDC40-212ENST00000574799 ITGA4P13612 1032 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 ALDH3A1P30838 453 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 IFI35P80217 286 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-212ENST00000574799 DR1Q01658 176 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 NAB2Q15742 525 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 C6orf118Q5T5N4 469 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 TMC3Q7Z5M5 1100 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 AGAP1Q9UPQ3 857 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 A0A087X0T9 212 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 F8W031 263 aaPredicted RBP10.34□□□□□ -0.75
CCDC40-212ENST00000574799 ASAP2O43150 1006 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 CREB3O43889 395 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 FAM228BP0C875 321 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 COPB2P35606 906 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 CALCOCO2Q13137 446 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 CWF19L1Q69YN2 538 aaKnown RBP10.34□□□□□ -0.75
CCDC40-212ENST00000574799 CROCCP2Q86T23 111 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 PNMA1Q8ND90 353 aa10.34□□□□□ -0.75
CCDC40-212ENST00000574799 U2AF1L4Q8WU68 220 aaKnown RBP10.34□□□□□ -0.75
CCDC40-212ENST00000574799 NEUROG2Q9H2A3 272 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms