RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 TPCN1Q9ULQ1 816 aa23.78■■□□□ 1.4
CHRNB1-206ENST00000574054 TMEM150BA6NC51 233 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 FAM86C2PA6NEL3 165 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 SLC37A4O43826 429 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 TBX10O75333 385 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 DARSP14868 501 aaKnown RBP23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 XBP1P17861 261 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 NDUFV1P49821 464 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 THNSL1Q8IYQ7 743 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 RNF169Q8NCN4 708 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 MICAL1Q8TDZ2 1067 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 SH2D3AQ9BRG2 576 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 LRFN3Q9BTN0 628 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 ELAC1Q9H777 363 aaKnown RBP23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 PCDHGC5Q9Y5F6 944 aa23.77■■□□□ 1.4
CHRNB1-206ENST00000574054 DDX11L8A8MPP1 907 aa23.76■■□□□ 1.39
CHRNB1-206ENST00000574054 FGFR4P22455 802 aa23.76■■□□□ 1.39
CHRNB1-206ENST00000574054 NRIP1P48552 1158 aa23.76■■□□□ 1.39
CHRNB1-206ENST00000574054 TARBP2Q15633 366 aaKnown RBP23.76■■□□□ 1.39
CHRNB1-206ENST00000574054 RBM23Q86U06 439 aaKnown RBP23.76■■□□□ 1.39
CHRNB1-206ENST00000574054 COLGALT1Q8NBJ5 622 aa23.76■■□□□ 1.39
CHRNB1-206ENST00000574054 PHF20Q9BVI0 1012 aa23.76■■□□□ 1.39
CHRNB1-206ENST00000574054 NIFKQ9BYG3 293 aaKnown RBP23.76■■□□□ 1.39
CHRNB1-206ENST00000574054 FNDC1Q4ZHG4 1894 aaPredicted RBP23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 PI4K2BG5E9Z4 385 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 HOXA2O43364 376 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 PFKFB2O60825 505 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 FGF18O76093 207 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 ZP2Q05996 745 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 ADAM15Q13444 863 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 DRP2Q13474 957 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 B3GNT9Q6UX72 402 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 NEK8Q86SG6 692 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 ABI1Q8IZP0 508 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 TMEM117Q9H0C3 514 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 GJB4Q9NTQ9 266 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 PPP4R2Q9NY27 417 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 PRKAG3Q9UGI9 489 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 CD207Q9UJ71 328 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 STK36Q9NRP7 1315 aa23.75■■□□□ 1.39
CHRNB1-206ENST00000574054 CSDE1O75534 798 aaKnown RBP23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 LAG3P18627 525 aa23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 DNM2P50570 870 aa23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 SMAD4Q13485 552 aaKnown RBP23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 CSPP1Q1MSJ5 1256 aa23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 ECHDC2Q86YB7 292 aa23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 ADHFE1Q8IWW8 467 aa23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 GCOM2Q9BZD3 368 aaPredicted RBP23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 CWH43Q9H720 699 aa23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 TLR9Q9NR96 1032 aa23.74■■□□□ 1.39
CHRNB1-206ENST00000574054 MBTPS2O43462 519 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 STBD1O95210 358 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 AK2P54819 239 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 PSMC5P62195 406 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 UBE3AQ05086 875 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 ANKRD1Q15327 319 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 PLA2G4FQ68DD2 849 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 PIK3AP1Q6ZUJ8 805 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 EFHBQ8N7U6 833 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 OXER1Q8TDS5 423 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 CASD1Q96PB1 797 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 TLE6Q9H808 572 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 RNF19AQ9NV58 838 aa23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 ORC3Q9UBD5 711 aaPredicted RBP23.73■■□□□ 1.39
CHRNB1-206ENST00000574054 EML1O00423 815 aa23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 MARCH6O60337 910 aa23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 CCNT1O60563 726 aaKnown RBP23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 GCFC2P16383 781 aaKnown RBP23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 ANAPC15P60006 121 aa23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 SMAD2Q15796 467 aaKnown RBP23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 FAM20AQ96MK3 541 aa23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 C11orf16Q9NQ32 467 aa23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 SUCLA2Q9P2R7 463 aaPredicted RBP23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 VAV3Q9UKW4 847 aa23.72■■□□□ 1.39
CHRNB1-206ENST00000574054 PLXNA4Q9HCM2 1894 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 GPR37L1O60883 481 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 CTDNEP1O95476 244 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 CDC42EP1Q00587 391 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 PPP2R5CQ13362 524 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 LRRC55Q6ZSA7 311 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 RHPN2Q8IUC4 686 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 LRRC43Q8N309 656 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 WASF1Q92558 559 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 CEP89Q96ST8 783 aa23.71■■□□□ 1.39
CHRNB1-206ENST00000574054 A0A087WZ62 844 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 IGKV6-21A0A0C4DH24 114 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 PER2O15055 1255 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 ALADP13716 330 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 PBX3P40426 434 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 QARSP47897 775 aaKnown RBP23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 ERVFC1P60507 584 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 PPP4R3AQ6IN85 833 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 ANO5Q75V66 913 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 NECAB1Q8N987 351 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 MSLNLQ96KJ4 702 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 ZNF558Q96NG5 402 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 POP1Q99575 1024 aaKnown RBP23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 FDXACB1Q9BRP7 624 aaPredicted RBP23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 KCNMB3Q9NPA1 279 aa23.7■■□□□ 1.38
CHRNB1-206ENST00000574054 DACT1Q9NYF0 836 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms