RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 CTTNQ14247 550 aaKnown RBP12.72□□□□□ -0.37
RPAIN-214ENST00000574003 XKR3Q5GH77 459 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 NCAPH2Q6IBW4 605 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 PPP4R3AQ6IN85 833 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 DIS3L2Q8IYB7 885 aaKnown RBP12.72□□□□□ -0.37
RPAIN-214ENST00000574003 CMTR2Q8IYT2 770 aaKnown RBP12.72□□□□□ -0.37
RPAIN-214ENST00000574003 NLRP7Q8WX94 980 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 DYDC2Q96IM9 177 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 FAM20AQ96MK3 541 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 SCLT1Q96NL6 688 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 RNF19AQ9NV58 838 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 COG5Q9UP83 839 aa12.72□□□□□ -0.37
RPAIN-214ENST00000574003 A0A087WZ62 844 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 C5orf67F2Z3F1 127 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 MMP1P03956 469 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 ITGB1P05556 798 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 DARSP14868 501 aaKnown RBP12.71□□□□□ -0.37
RPAIN-214ENST00000574003 GCFC2P16383 781 aaKnown RBP12.71□□□□□ -0.37
RPAIN-214ENST00000574003 EIF4BP23588 611 aaKnown RBP12.71□□□□□ -0.37
RPAIN-214ENST00000574003 IRS1P35568 1242 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 CYP4A11Q02928 519 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 SPIRE1Q08AE8 756 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 CAMK1Q14012 370 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 PTPROQ16827 1216 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 SLC24A5Q71RS6 500 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 KLHL23Q8NBE8 558 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 RNF169Q8NCN4 708 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 FDXACB1Q9BRP7 624 aaPredicted RBP12.71□□□□□ -0.37
RPAIN-214ENST00000574003 SUCLA2Q9P2R7 463 aaPredicted RBP12.71□□□□□ -0.37
RPAIN-214ENST00000574003 PLAGL2Q9UPG8 496 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 LIMCH1Q9UPQ0 1083 aa12.71□□□□□ -0.37
RPAIN-214ENST00000574003 PLXNA4Q9HCM2 1894 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-214ENST00000574003 IGKV6-21A0A0C4DH24 114 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 RB1P06400 928 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 QARSP47897 775 aaKnown RBP12.7□□□□□ -0.38
RPAIN-214ENST00000574003 FAM189BP81408 668 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 EPHA7Q15375 998 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 AAK1Q2M2I8 961 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 LONRF3Q496Y0 759 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 TIGD5Q53EQ6 642 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 SPOUT1Q5T280 376 aaKnown RBP12.7□□□□□ -0.38
RPAIN-214ENST00000574003 ADGRD2Q7Z7M1 963 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 RHPN2Q8IUC4 686 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-214ENST00000574003 SPPL3Q8TCT6 385 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 TMEM143Q96AN5 459 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 LXNQ9BS40 222 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 C11orf84Q9BUA3 381 aaPredicted RBP12.7□□□□□ -0.38
RPAIN-214ENST00000574003 TMEM60Q9H2L4 133 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 NSUN3Q9H649 340 aaKnown RBP12.7□□□□□ -0.38
RPAIN-214ENST00000574003 IGFLR1Q9H665 355 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 BRMS1Q9HCU9 246 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 CYP26B1Q9NR63 512 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 C1orf112Q9NSG2 853 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 TYW1Q9NV66 732 aaKnown RBP12.7□□□□□ -0.38
RPAIN-214ENST00000574003 BDP1A6H8Y1 2624 aa12.7□□□□□ -0.38
RPAIN-214ENST00000574003 LINC01565O15544 149 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 MAFO75444 373 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-214ENST00000574003 P4HBP07237 508 aaKnown RBP12.69□□□□□ -0.38
RPAIN-214ENST00000574003 IL9P15248 144 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 PBX3P40426 434 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 DLX2Q07687 328 aaPredicted RBP12.69□□□□□ -0.38
RPAIN-214ENST00000574003 HYAL1Q12794 435 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 CLUL1Q15846 466 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 LRRC55Q6ZSA7 311 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 ECHDC2Q86YB7 292 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 TPH2Q8IWU9 490 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 POF1BQ8WVV4 589 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 CEP170P1Q96L14 293 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 NLRP4Q96MN2 994 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 ATP6V0A4Q9HBG4 840 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 CD320Q9NPF0 282 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 CLDND1Q9NY35 253 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 RWDD3Q9Y3V2 267 aa12.69□□□□□ -0.38
RPAIN-214ENST00000574003 TBX3O15119 743 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 SLITRK3O94933 977 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 ZSCAN20P17040 1043 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-214ENST00000574003 ATF7P17544 494 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-214ENST00000574003 YWHABP31946 246 aaKnown RBP12.68□□□□□ -0.38
RPAIN-214ENST00000574003 MCM7P33993 719 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 LTBRP36941 435 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 TXKP42681 527 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 TRIM29Q14134 588 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 CALCRLQ16602 461 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 XKR9Q5GH70 373 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 CLLU1OSQ5K130 101 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 ODR4Q5SWX8 454 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 COLGALT1Q8NBJ5 622 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 KHSRPQ92945 711 aaKnown RBP eCLIP12.68□□□□□ -0.38
RPAIN-214ENST00000574003 LPPQ93052 612 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 CASD1Q96PB1 797 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 EIF2AK1Q9BQI3 630 aaKnown RBP12.68□□□□□ -0.38
RPAIN-214ENST00000574003 GCOM2Q9BZD3 368 aaPredicted RBP12.68□□□□□ -0.38
RPAIN-214ENST00000574003 CWH43Q9H720 699 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 TMEM161AQ9NX61 479 aa12.68□□□□□ -0.38
RPAIN-214ENST00000574003 POTEMA6NI47 508 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 MEIS3P2A8K0S8 358 aa12.67□□□□□ -0.38
RPAIN-214ENST00000574003 BAG4O95429 457 aaKnown RBP12.67□□□□□ -0.38
RPAIN-214ENST00000574003 SRGAP2CP0DJJ0 459 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms