RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 TCEAL5Q5H9L2 206 aa19.57■□□□□ 0.72
SMG6-214ENST00000573827 FAM102BQ5T8I3 360 aa19.57■□□□□ 0.72
SMG6-214ENST00000573827 PLA2G4FQ68DD2 849 aa19.57■□□□□ 0.72
SMG6-214ENST00000573827 NAP1L4Q99733 375 aaKnown RBP19.57■□□□□ 0.72
SMG6-214ENST00000573827 C11orf84Q9BUA3 381 aaPredicted RBP19.57■□□□□ 0.72
SMG6-214ENST00000573827 UBE2ZQ9H832 354 aaPredicted RBP19.57■□□□□ 0.72
SMG6-214ENST00000573827 PLAGL2Q9UPG8 496 aa19.57■□□□□ 0.72
SMG6-214ENST00000573827 DDX11L8A8MPP1 907 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 NPEPPSP55786 919 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 EPHA7Q15375 998 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 PAN2Q504Q3 1202 aaKnown RBP19.56■□□□□ 0.72
SMG6-214ENST00000573827 ODR4Q5SWX8 454 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 P2RX5Q93086 422 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 MTMR9Q96QG7 549 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 UHRF1Q96T88 793 aaPredicted RBP19.56■□□□□ 0.72
SMG6-214ENST00000573827 LMAN2LQ9H0V9 348 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 ELAC1Q9H777 363 aaKnown RBP19.56■□□□□ 0.72
SMG6-214ENST00000573827 CYP26B1Q9NR63 512 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 RGL1Q9NZL6 768 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 HCSTQ9UBK5 93 aa19.56■□□□□ 0.72
SMG6-214ENST00000573827 DENND3A2RUS2 1198 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 TNFRSF10AO00220 468 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 CSDE1O75534 798 aaKnown RBP19.55■□□□□ 0.72
SMG6-214ENST00000573827 ITGB1P05556 798 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 P4HBP07237 508 aaKnown RBP19.55■□□□□ 0.72
SMG6-214ENST00000573827 RBM25P49756 843 aaKnown RBP19.55■□□□□ 0.72
SMG6-214ENST00000573827 ZNF598Q86UK7 904 aaKnown RBP19.55■□□□□ 0.72
SMG6-214ENST00000573827 C4orf19Q8IY42 314 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 SPPL3Q8TCT6 385 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 NEK9Q8TD19 979 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 HSD17B14Q9BPX1 270 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 LXNQ9BS40 222 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 NSUN3Q9H649 340 aaKnown RBP19.55■□□□□ 0.72
SMG6-214ENST00000573827 DHX33Q9H6R0 707 aaKnown RBP19.55■□□□□ 0.72
SMG6-214ENST00000573827 TMEM161AQ9NX61 479 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 PCDHB7Q9Y5E2 793 aa19.55■□□□□ 0.72
SMG6-214ENST00000573827 ZBTB39O15060 712 aa19.54■□□□□ 0.72
SMG6-214ENST00000573827 FGFR1P11362 822 aa19.54■□□□□ 0.72
SMG6-214ENST00000573827 ATF7P17544 494 aaPredicted RBP19.54■□□□□ 0.72
SMG6-214ENST00000573827 FGFR4P22455 802 aa19.54■□□□□ 0.72
SMG6-214ENST00000573827 FOSBP53539 338 aa19.54■□□□□ 0.72
SMG6-214ENST00000573827 CTC1Q2NKJ3 1217 aa19.54■□□□□ 0.72
SMG6-214ENST00000573827 LEXMQ3ZCV2 418 aa19.54■□□□□ 0.72
SMG6-214ENST00000573827 CCDC83Q8IWF9 413 aa19.54■□□□□ 0.72
SMG6-214ENST00000573827 SLFN12Q8IYM2 578 aa19.54■□□□□ 0.72
SMG6-214ENST00000573827 LLPHQ9BRT6 129 aaKnown RBP19.54■□□□□ 0.72
SMG6-214ENST00000573827 BRMS1Q9HCU9 246 aa19.54■□□□□ 0.72
SMG6-214ENST00000573827 ALG13Q9NP73 1137 aaKnown RBP19.54■□□□□ 0.72
SMG6-214ENST00000573827 A0A087WZ62 844 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 SLITRK3O94933 977 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 LTBRP36941 435 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 NAALADL2Q58DX5 795 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 LRRC55Q6ZSA7 311 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 KSR1Q8IVT5 923 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 KLHL23Q8NBE8 558 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.53■□□□□ 0.72
SMG6-214ENST00000573827 DYDC2Q96IM9 177 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 FDXACB1Q9BRP7 624 aaPredicted RBP19.53■□□□□ 0.72
SMG6-214ENST00000573827 TMEM60Q9H2L4 133 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 CWH43Q9H720 699 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 SUCLA2Q9P2R7 463 aaPredicted RBP19.53■□□□□ 0.72
SMG6-214ENST00000573827 LRFN2Q9ULH4 789 aa19.53■□□□□ 0.72
SMG6-214ENST00000573827 TBKBP1A7MCY6 615 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 LYPLA2O95372 231 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 CDC42EP1Q00587 391 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 HYAL1Q12794 435 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 NCAPH2Q6IBW4 605 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 ZNF410Q86VK4 478 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 ECHDC2Q86YB7 292 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 NLRP7Q8WX94 980 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 PABPC5Q96DU9 382 aaKnown RBP19.52■□□□□ 0.72
SMG6-214ENST00000573827 CASD1Q96PB1 797 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 TRAIPQ9BWF2 469 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 IFT122Q9HBG6 1241 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 PPME1Q9Y570 386 aa19.52■□□□□ 0.72
SMG6-214ENST00000573827 A0A0U1RQF3 1178 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 IBSPP21815 317 aaPredicted RBP19.51■□□□□ 0.71
SMG6-214ENST00000573827 KCNA5P22460 613 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 YWHABP31946 246 aaKnown RBP19.51■□□□□ 0.71
SMG6-214ENST00000573827 IRS1P35568 1242 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 GUCY1B3Q02153 619 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 CYP4A11Q02928 519 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 CTTNQ14247 550 aaKnown RBP19.51■□□□□ 0.71
SMG6-214ENST00000573827 CALCRLQ16602 461 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 CLLU1OSQ5K130 101 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 GCOM2Q9BZD3 368 aaPredicted RBP19.51■□□□□ 0.71
SMG6-214ENST00000573827 TMEM117Q9H0C3 514 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 ZSWIM4Q9H7M6 989 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 ATP6V0A4Q9HBG4 840 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 XPNPEP1Q9NQW7 623 aa19.51■□□□□ 0.71
SMG6-214ENST00000573827 TYW1Q9NV66 732 aaKnown RBP19.51■□□□□ 0.71
SMG6-214ENST00000573827 PLXNA4Q9HCM2 1894 aa19.5■□□□□ 0.71
SMG6-214ENST00000573827 NEMFO60524 1076 aa19.5■□□□□ 0.71
SMG6-214ENST00000573827 DKC1O60832 514 aaKnown RBP eCLIP19.5■□□□□ 0.713e-6■■■■■ 27.9
SMG6-214ENST00000573827 RHPN2Q8IUC4 686 aa19.5■□□□□ 0.71
SMG6-214ENST00000573827 FBXO18Q8NFZ0 1043 aa19.5■□□□□ 0.71
SMG6-214ENST00000573827 CEP170P1Q96L14 293 aa19.5■□□□□ 0.71
SMG6-214ENST00000573827 ZSCAN31Q96LW9 406 aaPredicted RBP19.5■□□□□ 0.71
SMG6-214ENST00000573827 EIF2AK1Q9BQI3 630 aaKnown RBP19.5■□□□□ 0.71
SMG6-214ENST00000573827 RNF216Q9NWF9 866 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms