RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 MAP7D2Q96T17 732 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 UBE2ZQ9H832 354 aaPredicted RBP19.44■□□□□ 0.7
SMG6-212ENST00000573153 BRMS1Q9HCU9 246 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 C1orf112Q9NSG2 853 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 RGL1Q9NZL6 768 aa19.44■□□□□ 0.7
SMG6-212ENST00000573153 ZBTB39O15060 712 aa19.43■□□□□ 0.7
SMG6-212ENST00000573153 CSDE1O75534 798 aaKnown RBP19.43■□□□□ 0.7
SMG6-212ENST00000573153 ITGB1P05556 798 aa19.43■□□□□ 0.7
SMG6-212ENST00000573153 QARSP47897 775 aaKnown RBP19.43■□□□□ 0.7
SMG6-212ENST00000573153 EPHA7Q15375 998 aa19.43■□□□□ 0.7
SMG6-212ENST00000573153 SKIV2LQ15477 1246 aaKnown RBP19.43■□□□□ 0.7
SMG6-212ENST00000573153 PAN2Q504Q3 1202 aaKnown RBP19.43■□□□□ 0.7
SMG6-212ENST00000573153 TCEAL5Q5H9L2 206 aa19.43■□□□□ 0.7
SMG6-212ENST00000573153 ZNF598Q86UK7 904 aaKnown RBP19.43■□□□□ 0.7
SMG6-212ENST00000573153 C4orf19Q8IY42 314 aa19.43■□□□□ 0.7
SMG6-212ENST00000573153 P2RX5Q93086 422 aa19.43■□□□□ 0.7
SMG6-212ENST00000573153 TMEM60Q9H2L4 133 aa19.43■□□□□ 0.7
SMG6-212ENST00000573153 DHX33Q9H6R0 707 aaKnown RBP19.43■□□□□ 0.7
SMG6-212ENST00000573153 ELAC1Q9H777 363 aaKnown RBP19.43■□□□□ 0.7
SMG6-212ENST00000573153 SH2B1Q9NRF2 756 aaPredicted RBP19.43■□□□□ 0.7
SMG6-212ENST00000573153 PLAGL2Q9UPG8 496 aa19.43■□□□□ 0.7
SMG6-212ENST00000573153 P4HBP07237 508 aaKnown RBP19.42■□□□□ 0.7
SMG6-212ENST00000573153 STAG3L1P0CL83 205 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 FGFR1P11362 822 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 TMOD1P28289 359 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 TIGD5Q53EQ6 642 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 LRRC55Q6ZSA7 311 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 ZNF710Q8N1W2 664 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 DYDC2Q96IM9 177 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 HSD17B14Q9BPX1 270 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 LXNQ9BS40 222 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 PLVAPQ9BX97 442 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 CWH43Q9H720 699 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 CYP26B1Q9NR63 512 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 TMEM161AQ9NX61 479 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 RWDD3Q9Y3V2 267 aa19.42■□□□□ 0.7
SMG6-212ENST00000573153 A0A087WZ62 844 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 DDX11L8A8MPP1 907 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 SLITRK3O94933 977 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 IRS1P35568 1242 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 LTBRP36941 435 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 GUCY1B3Q02153 619 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 CTC1Q2NKJ3 1217 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 KSR1Q8IVT5 923 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.41■□□□□ 0.7
SMG6-212ENST00000573153 SPPL3Q8TCT6 385 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 NEK9Q8TD19 979 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 UHRF1Q96T88 793 aaPredicted RBP19.41■□□□□ 0.7
SMG6-212ENST00000573153 FDXACB1Q9BRP7 624 aaPredicted RBP19.41■□□□□ 0.7
SMG6-212ENST00000573153 C11orf84Q9BUA3 381 aaPredicted RBP19.41■□□□□ 0.7
SMG6-212ENST00000573153 LMAN2LQ9H0V9 348 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 IFT122Q9HBG6 1241 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 ALG13Q9NP73 1137 aaKnown RBP19.41■□□□□ 0.7
SMG6-212ENST00000573153 XPNPEP1Q9NQW7 623 aa19.41■□□□□ 0.7
SMG6-212ENST00000573153 DENND3A2RUS2 1198 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 LYPLA2O95372 231 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 CD2BP2O95400 341 aaKnown RBP19.4■□□□□ 0.7
SMG6-212ENST00000573153 TRIM29Q14134 588 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 RABEP1Q15276 862 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 PTPROQ16827 1216 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 ODR4Q5SWX8 454 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 NCAPH2Q6IBW4 605 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 ECHDC2Q86YB7 292 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 SLFN12Q8IYM2 578 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 KLHL23Q8NBE8 558 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 CASD1Q96PB1 797 aa19.4■□□□□ 0.7
SMG6-212ENST00000573153 NSUN3Q9H649 340 aaKnown RBP19.4■□□□□ 0.7
SMG6-212ENST00000573153 TNFRSF10AO00220 468 aa19.39■□□□□ 0.69
SMG6-212ENST00000573153 HMGN5P82970 282 aaKnown RBP19.39■□□□□ 0.69
SMG6-212ENST00000573153 HYAL1Q12794 435 aa19.39■□□□□ 0.69
SMG6-212ENST00000573153 CTTNQ14247 550 aaKnown RBP19.39■□□□□ 0.69
SMG6-212ENST00000573153 LEXMQ3ZCV2 418 aa19.39■□□□□ 0.69
SMG6-212ENST00000573153 CLLU1OSQ5K130 101 aa19.39■□□□□ 0.69
SMG6-212ENST00000573153 ZNF410Q86VK4 478 aa19.39■□□□□ 0.69
SMG6-212ENST00000573153 EIF2AK1Q9BQI3 630 aaKnown RBP19.39■□□□□ 0.69
SMG6-212ENST00000573153 TRAIPQ9BWF2 469 aa19.39■□□□□ 0.69
SMG6-212ENST00000573153 SUCLA2Q9P2R7 463 aaPredicted RBP19.39■□□□□ 0.69
SMG6-212ENST00000573153 PCDHB7Q9Y5E2 793 aa19.39■□□□□ 0.69
SMG6-212ENST00000573153 NCOR1O75376 2440 aa19.39■□□□□ 0.69
SMG6-212ENST00000573153 A0A0U1RQF3 1178 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 BDP1A6H8Y1 2624 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 TBKBP1A7MCY6 615 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 YWHABP31946 246 aaKnown RBP19.38■□□□□ 0.69
SMG6-212ENST00000573153 GTF2F1P35269 517 aaKnown RBP eCLIP19.38■□□□□ 0.69
SMG6-212ENST00000573153 CYP4A11Q02928 519 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 CALCRLQ16602 461 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 AAK1Q2M2I8 961 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 NAALADL2Q58DX5 795 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 ADGRD2Q7Z7M1 963 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 FBXO18Q8NFZ0 1043 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 NLRP7Q8WX94 980 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 PABPC5Q96DU9 382 aaKnown RBP19.38■□□□□ 0.69
SMG6-212ENST00000573153 MINDY3Q9H8M7 445 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 CD320Q9NPF0 282 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 TYW1Q9NV66 732 aaKnown RBP19.38■□□□□ 0.69
SMG6-212ENST00000573153 PPME1Q9Y570 386 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 PCDHGC5Q9Y5F6 944 aa19.38■□□□□ 0.69
SMG6-212ENST00000573153 POTEMA6NI47 508 aa19.37■□□□□ 0.69
SMG6-212ENST00000573153 NEMFO60524 1076 aa19.37■□□□□ 0.69
SMG6-212ENST00000573153 SPATA31C1P0DKV0 1188 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms