RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 FOSL2P15408 326 aa23.06■■□□□ 1.28
CHMP6-204ENST00000572778 RPA1P27694 616 aa23.06■■□□□ 1.28
CHMP6-204ENST00000572778 HTRA4P83105 476 aaPredicted RBP23.06■■□□□ 1.28
CHMP6-204ENST00000572778 EMC2Q15006 297 aa23.06■■□□□ 1.28
CHMP6-204ENST00000572778 BRAPQ7Z569 592 aa23.06■■□□□ 1.28
CHMP6-204ENST00000572778 KSR1Q8IVT5 923 aa23.06■■□□□ 1.28
CHMP6-204ENST00000572778 NLRP4Q96MN2 994 aa23.06■■□□□ 1.28
CHMP6-204ENST00000572778 ADAM2Q99965 735 aa23.06■■□□□ 1.28
CHMP6-204ENST00000572778 GCOM2Q9BZD3 368 aaPredicted RBP23.06■■□□□ 1.28
CHMP6-204ENST00000572778 TSPYL2Q9H2G4 693 aaPredicted RBP23.06■■□□□ 1.28
CHMP6-204ENST00000572778 A0A087WZ62 844 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 XRCC6P12956 609 aaKnown RBP eCLIP23.05■■□□□ 1.28
CHMP6-204ENST00000572778 SYT1P21579 422 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 CCT6AP40227 531 aaKnown RBP23.05■■□□□ 1.28
CHMP6-204ENST00000572778 PRPHP41219 470 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 RARRES1P49788 294 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 PDIA5Q14554 519 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 HAUS3Q68CZ6 603 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 TCP11Q8WWU5 503 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 PRPF31Q8WWY3 499 aaKnown RBP23.05■■□□□ 1.28
CHMP6-204ENST00000572778 PSPC1Q8WXF1 523 aaKnown RBP23.05■■□□□ 1.28
CHMP6-204ENST00000572778 ARNTL2Q8WYA1 636 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 NACC1Q96RE7 527 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 GAS2L1Q99501 681 aaPredicted RBP23.05■■□□□ 1.28
CHMP6-204ENST00000572778 MTRQ99707 1265 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 FDXACB1Q9BRP7 624 aaPredicted RBP23.05■■□□□ 1.28
CHMP6-204ENST00000572778 COL4A3BPQ9Y5P4 624 aa23.05■■□□□ 1.28
CHMP6-204ENST00000572778 WDR81Q562E7 1941 aa23.04■■□□□ 1.28
CHMP6-204ENST00000572778 GAS2O43903 313 aaKnown RBP23.04■■□□□ 1.28
CHMP6-204ENST00000572778 MGEA5O60502 916 aa23.04■■□□□ 1.28
CHMP6-204ENST00000572778 CSDE1O75534 798 aaKnown RBP23.04■■□□□ 1.28
CHMP6-204ENST00000572778 FGFR4P22455 802 aa23.04■■□□□ 1.28
CHMP6-204ENST00000572778 ATP2C1P98194 919 aaPredicted RBP23.04■■□□□ 1.28
CHMP6-204ENST00000572778 IL17AQ16552 155 aa23.04■■□□□ 1.28
CHMP6-204ENST00000572778 POTEGQ6S5H5 508 aa23.04■■□□□ 1.28
CHMP6-204ENST00000572778 SPRED2Q7Z698 418 aa23.04■■□□□ 1.28
CHMP6-204ENST00000572778 ZNF410Q86VK4 478 aa23.04■■□□□ 1.28
CHMP6-204ENST00000572778 IGSF22Q8N9C0 903 aa23.04■■□□□ 1.28
CHMP6-204ENST00000572778 EVPLQ92817 2033 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 LINC01553A4QN01 128 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 DGAT1O75907 488 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 HSP90AA1P07900 732 aaKnown RBP23.03■■□□□ 1.28
CHMP6-204ENST00000572778 SRGAP2CP0DJJ0 459 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 FAM43BQ6ZT52 329 aaPredicted RBP23.03■■□□□ 1.28
CHMP6-204ENST00000572778 SNX29Q8TEQ0 813 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 ATP6V0A4Q9HBG4 840 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 XPNPEP1Q9NQW7 623 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 MTUS1Q9ULD2 1270 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 LRFN2Q9ULH4 789 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 STK24Q9Y6E0 443 aa23.03■■□□□ 1.28
CHMP6-204ENST00000572778 GBF1Q92538 1859 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 PTPRSQ13332 1948 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 PP2D1A8MPX8 630 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 RFXAPO00287 272 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 USO1O60763 962 aaKnown RBP23.02■■□□□ 1.28
CHMP6-204ENST00000572778 STAG3L1P0CL83 205 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 ZSCAN20P17040 1043 aaPredicted RBP23.02■■□□□ 1.28
CHMP6-204ENST00000572778 IGFBP4P22692 258 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 LAMTOR4Q0VGL1 99 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 KRT79Q5XKE5 535 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 NPAS4Q8IUM7 802 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 SP7Q8TDD2 431 aaPredicted RBP23.02■■□□□ 1.28
CHMP6-204ENST00000572778 TGS1Q96RS0 853 aaKnown RBP23.02■■□□□ 1.28
CHMP6-204ENST00000572778 INO80BQ9C086 356 aaPredicted RBP23.02■■□□□ 1.28
CHMP6-204ENST00000572778 RGS18Q9NS28 235 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 C1orf112Q9NSG2 853 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 MICAL3Q7RTP6 2002 aa23.02■■□□□ 1.28
CHMP6-204ENST00000572778 ASAP2O43150 1006 aa23.01■■□□□ 1.27
CHMP6-204ENST00000572778 MUTP22033 750 aa23.01■■□□□ 1.27
CHMP6-204ENST00000572778 SARSP49591 514 aaKnown RBP23.01■■□□□ 1.27
CHMP6-204ENST00000572778 ECM1Q16610 540 aa23.01■■□□□ 1.27
CHMP6-204ENST00000572778 SLC24A5Q71RS6 500 aa23.01■■□□□ 1.27
CHMP6-204ENST00000572778 MAEAQ7L5Y9 396 aa23.01■■□□□ 1.27
CHMP6-204ENST00000572778 DBR1Q9UK59 544 aaKnown RBP23.01■■□□□ 1.27
CHMP6-204ENST00000572778 KIAA1024Q9UPX6 916 aa23.01■■□□□ 1.27
CHMP6-204ENST00000572778 PCDHB7Q9Y5E2 793 aa23.01■■□□□ 1.27
CHMP6-204ENST00000572778 ARHGEF35A5YM69 484 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 VWA3AA6NCI4 1184 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 SFPQP23246 707 aaKnown RBP eCLIP23■■□□□ 1.27
CHMP6-204ENST00000572778 CDC25AP30304 524 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 RESTQ13127 1097 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 ADGRE1Q14246 886 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 DSC3Q14574 896 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 FIBCD1Q8N539 461 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 RNF149Q8NC42 400 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 IFT122Q9HBG6 1241 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 MTMR6Q9Y217 621 aa23■■□□□ 1.27
CHMP6-204ENST00000572778 EPOPA6NHQ4 379 aa22.99■■□□□ 1.27
CHMP6-204ENST00000572778 C9IYK1 514 aa22.99■■□□□ 1.27
CHMP6-204ENST00000572778 STX6O43752 255 aa22.99■■□□□ 1.27
CHMP6-204ENST00000572778 DGKIO75912 1065 aa22.99■■□□□ 1.27
CHMP6-204ENST00000572778 BMP15O95972 392 aa22.99■■□□□ 1.27
CHMP6-204ENST00000572778 ERVK-21P61565 698 aa22.99■■□□□ 1.27
CHMP6-204ENST00000572778 MXD4Q14582 209 aaPredicted RBP22.99■■□□□ 1.27
CHMP6-204ENST00000572778 ARL6IP4Q66PJ3 421 aaKnown RBP22.99■■□□□ 1.27
CHMP6-204ENST00000572778 CATSPER4Q7RTX7 472 aa22.99■■□□□ 1.27
CHMP6-204ENST00000572778 MAFAQ8NHW3 353 aaPredicted RBP22.99■■□□□ 1.27
CHMP6-204ENST00000572778 DDX19AQ9NUU7 478 aaKnown RBP22.99■■□□□ 1.27
CHMP6-204ENST00000572778 RNF216Q9NWF9 866 aaPredicted RBP22.99■■□□□ 1.27
CHMP6-204ENST00000572778 BTG3Q14201 252 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms