RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 PPP2R2DQ66LE6 453 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 EFCAB12Q6NXP0 572 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 OTUD6AQ7L8S5 288 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 NME8Q8N427 588 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 SPRYD3Q8NCJ5 442 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 ERMNQ8TAM6 284 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 SEPT8Q92599 483 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 SNX21Q969T3 373 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 INTS4Q96HW7 963 aaKnown RBP8.71□□□□□ -1.02
SMG6-211ENST00000572369 PPP1R16BQ96T49 567 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 EIF2AK1Q9BQI3 630 aaKnown RBP8.71□□□□□ -1.02
SMG6-211ENST00000572369 SH2D3AQ9BRG2 576 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 LXNQ9BS40 222 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 RAB34Q9BZG1 259 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 TMEM60Q9H2L4 133 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 ZSWIM4Q9H7M6 989 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 RGL1Q9NZL6 768 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 TRPV2Q9Y5S1 764 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 FAM186AA6NE01 2351 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 FAM208BQ5VWN6 2430 aa8.71□□□□□ -1.02
SMG6-211ENST00000572369 ABHD14A-ACY1A0A1B0GW23 586 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 TMEM150BA6NC51 233 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 POTEMA6NI47 508 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 EFCAB14O75071 495 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 C22orf31O95567 290 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 CHRNA1P02708 482 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 VTNP04004 478 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 GHRP10912 638 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 HOXB3P14651 431 aaPredicted RBP8.7□□□□□ -1.02
SMG6-211ENST00000572369 ATP2A2P16615 1042 aaKnown RBP8.7□□□□□ -1.02
SMG6-211ENST00000572369 CLCN3P51790 818 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 POLGP54098 1239 aaPredicted RBP8.7□□□□□ -1.02
SMG6-211ENST00000572369 PTGDRQ13258 359 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 XKR9Q5GH70 373 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 FAM26DQ5JW98 314 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 PLA2G4FQ68DD2 849 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 B3GNT9Q6UX72 402 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 FERMT3Q86UX7 667 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 EXOC8Q8IYI6 725 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 LRRC71Q8N4P6 559 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 DBF4BQ8NFT6 615 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 TET1Q8NFU7 2136 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 NEK9Q8TD19 979 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 APBB2Q92870 758 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 CEP170P1Q96L14 293 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 MTMR9Q96QG7 549 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 SLC9A7Q96T83 725 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 JPH2Q9BR39 696 aaPredicted RBP8.7□□□□□ -1.02
SMG6-211ENST00000572369 ZBED2Q9BTP6 218 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 IFIH1Q9BYX4 1025 aaKnown RBP8.7□□□□□ -1.02
SMG6-211ENST00000572369 CELF4Q9BZC1 486 aaKnown RBP8.7□□□□□ -1.02
SMG6-211ENST00000572369 ALG13Q9NP73 1137 aaKnown RBP8.7□□□□□ -1.02
SMG6-211ENST00000572369 DACH1Q9UI36 760 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 PCDHB6Q9Y5E3 794 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 MICAL3Q7RTP6 2002 aa8.7□□□□□ -1.02
SMG6-211ENST00000572369 ASH1LQ9NR48 2969 aaKnown RBP8.69□□□□□ -1.02
SMG6-211ENST00000572369 KMT2EQ8IZD2 1858 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 ZBTB42B2RXF5 422 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 RFXAPO00287 272 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 LAD1O00515 517 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 CXCL10P02778 98 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 AMHP03971 560 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 IL9P15248 144 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 YWHABP31946 246 aaKnown RBP8.69□□□□□ -1.02
SMG6-211ENST00000572369 TOB1P50616 345 aaPredicted RBP8.69□□□□□ -1.02
SMG6-211ENST00000572369 SPIRE1Q08AE8 756 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 PAK2Q13177 524 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 MBTPS1Q14703 1052 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 GPNMBQ14956 572 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 KIZQ2M2Z5 673 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 PLEKHG4Q58EX7 1191 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 ODR4Q5SWX8 454 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 HAUS3Q68CZ6 603 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 TRAF7Q6Q0C0 670 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 DTHD1Q6ZMT9 781 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 BRAPQ7Z569 592 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 RPAINQ86UA6 219 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 C4orf19Q8IY42 314 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 KIAA0319LQ8IZA0 1049 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 NLRP7Q8WX94 980 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 SLC7A3Q8WY07 619 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 RMDN1Q96DB5 314 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 NIFKQ9BYG3 293 aaKnown RBP8.69□□□□□ -1.02
SMG6-211ENST00000572369 CYP26B1Q9NR63 512 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 BMP2KQ9NSY1 1161 aaPredicted RBP8.69□□□□□ -1.02
SMG6-211ENST00000572369 LRWD1Q9UFC0 647 aa8.69□□□□□ -1.02
SMG6-211ENST00000572369 FLNBO75369 2602 aaKnown RBP8.68□□□□□ -1.02
SMG6-211ENST00000572369 PTPRSQ13332 1948 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 RPS6KA5O75582 802 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 SLITRK3O94933 977 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 UPP2O95045 317 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 SYT1P21579 422 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 IBSPP21815 317 aaPredicted RBP8.68□□□□□ -1.02
SMG6-211ENST00000572369 CD52P31358 61 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 CCT6AP40227 531 aaKnown RBP8.68□□□□□ -1.02
SMG6-211ENST00000572369 RFC5P40937 340 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 RABGGTBP53611 331 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 NPEPPSP55786 919 aa8.68□□□□□ -1.02
SMG6-211ENST00000572369 NLRP11P59045 1033 aaKnown RBP8.68□□□□□ -1.02
SMG6-211ENST00000572369 WDR5P61964 334 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms