RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 SLC39A11Q8N1S5 342 aa22.53■■□□□ 1.2
CCDC40-206ENST00000572083 MRPL43Q8N983 215 aaKnown RBP22.53■■□□□ 1.2
CCDC40-206ENST00000572083 IGLV3-22A0A075B6J6 115 aa22.52■■□□□ 1.2
CCDC40-206ENST00000572083 CLASP2O75122 1294 aaKnown RBP22.52■■□□□ 1.2
CCDC40-206ENST00000572083 ZSCAN20P17040 1043 aaPredicted RBP22.52■■□□□ 1.2
CCDC40-206ENST00000572083 RARS2Q5T160 578 aaKnown RBP22.52■■□□□ 1.2
CCDC40-206ENST00000572083 CREB3L3Q68CJ9 461 aa22.52■■□□□ 1.2
CCDC40-206ENST00000572083 APOA5Q6Q788 366 aa22.52■■□□□ 1.2
CCDC40-206ENST00000572083 SYNE3Q6ZMZ3 975 aa22.52■■□□□ 1.2
CCDC40-206ENST00000572083 LRRC71Q8N4P6 559 aa22.52■■□□□ 1.2
CCDC40-206ENST00000572083 C12orf76Q8N812 135 aaPredicted RBP22.52■■□□□ 1.2
CCDC40-206ENST00000572083 HELQQ8TDG4 1101 aa22.52■■□□□ 1.2
CCDC40-206ENST00000572083 RBM28Q9NW13 759 aaKnown RBP22.52■■□□□ 1.2
CCDC40-206ENST00000572083 MAFBQ9Y5Q3 323 aaPredicted RBP22.52■■□□□ 1.2
CCDC40-206ENST00000572083 MYO10Q9HD67 2058 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 MYH9P35579 1960 aaKnown RBP22.51■■□□□ 1.19
CCDC40-206ENST00000572083 NT5C1B-RDH14C9J2C7 533 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 NBL1P41271 181 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 METAP2P50579 478 aaKnown RBP eCLIP22.51■■□□□ 1.19
CCDC40-206ENST00000572083 FUT2Q10981 343 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 JAKMIP3Q5VZ66 844 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 KANK3Q6NY19 840 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 TDRD5Q8NAT2 981 aaKnown RBP22.51■■□□□ 1.19
CCDC40-206ENST00000572083 MAP7D2Q96T17 732 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 ZNF577Q9BSK1 485 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 ADAMTS10Q9H324 1103 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 BARHL2Q9NY43 387 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 TCEAL9Q9UHQ7 104 aa22.51■■□□□ 1.19
CCDC40-206ENST00000572083 V9GY48 417 aaPredicted RBP22.51■■□□□ 1.19
CCDC40-206ENST00000572083 PTPRZ1P23471 2315 aaPredicted RBP22.5■■□□□ 1.19
CCDC40-206ENST00000572083 FGFR4P22455 802 aa22.5■■□□□ 1.19
CCDC40-206ENST00000572083 MTHFRP42898 656 aa22.5■■□□□ 1.19
CCDC40-206ENST00000572083 RTN1Q16799 776 aa22.5■■□□□ 1.19
CCDC40-206ENST00000572083 ASTLQ6HA08 431 aaPredicted RBP22.5■■□□□ 1.19
CCDC40-206ENST00000572083 EFCAB12Q6NXP0 572 aa22.5■■□□□ 1.19
CCDC40-206ENST00000572083 TEX2Q8IWB9 1127 aa22.5■■□□□ 1.19
CCDC40-206ENST00000572083 AUTS2Q8WXX7 1259 aa22.5■■□□□ 1.19
CCDC40-206ENST00000572083 MFSD1Q9H3U5 465 aa22.5■■□□□ 1.19
CCDC40-206ENST00000572083 GABBR1Q9UBS5 961 aa22.5■■□□□ 1.19
CCDC40-206ENST00000572083 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.49■■□□□ 1.19
CCDC40-206ENST00000572083 hCG_1984214I3L0E3 225 aa22.49■■□□□ 1.19
CCDC40-206ENST00000572083 EIF4BP23588 611 aaKnown RBP22.49■■□□□ 1.19
CCDC40-206ENST00000572083 ZNF746Q6NUN9 644 aaPredicted RBP22.49■■□□□ 1.19
CCDC40-206ENST00000572083 FRMD5Q7Z6J6 570 aa22.49■■□□□ 1.19
CCDC40-206ENST00000572083 LINC01465Q8N7H1 131 aa22.49■■□□□ 1.19
CCDC40-206ENST00000572083 ZNF713Q8N859 430 aaPredicted RBP22.49■■□□□ 1.19
CCDC40-206ENST00000572083 SCLT1Q96NL6 688 aa22.49■■□□□ 1.19
CCDC40-206ENST00000572083 LIMD1Q9UGP4 676 aa22.49■■□□□ 1.19
CCDC40-206ENST00000572083 DBR1Q9UK59 544 aaKnown RBP22.49■■□□□ 1.19
CCDC40-206ENST00000572083 CEP131Q9UPN4 1083 aa22.49■■□□□ 1.19
CCDC40-206ENST00000572083 RIF1Q5UIP0 2472 aaKnown RBP22.48■■□□□ 1.19
CCDC40-206ENST00000572083 CXCL14O95715 111 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 PSAPP07602 524 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 EPCAMP16422 314 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 BCAR1P56945 870 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 FOXK2Q01167 660 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 KIAA1841Q6NSI8 718 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 TMEM173Q86WV6 379 aaPredicted RBP22.48■■□□□ 1.19
CCDC40-206ENST00000572083 SMAP1Q8IYB5 467 aaPredicted RBP22.48■■□□□ 1.19
CCDC40-206ENST00000572083 FEZF2Q8TBJ5 459 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 CRYGNQ8WXF5 182 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 TMEM169Q96HH4 297 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 TCEANC2Q96MN5 208 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 TBC1D22BQ9NU19 505 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 BRPF3Q9ULD4 1205 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 PCDHA10Q9Y5I2 948 aa22.48■■□□□ 1.19
CCDC40-206ENST00000572083 ADAMTS3O15072 1205 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 MAGEB2O15479 319 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 ZBTB43O43298 467 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 ZC3H11AO75152 810 aaKnown RBP eCLIP22.47■■□□□ 1.19
CCDC40-206ENST00000572083 TMOD1P28289 359 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 ALDH7A1P49419 539 aaKnown RBP22.47■■□□□ 1.19
CCDC40-206ENST00000572083 GPC3P51654 580 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 SETQ01105 290 aaPredicted RBP22.47■■□□□ 1.19
CCDC40-206ENST00000572083 NECTIN1Q15223 517 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 ZNF598Q86UK7 904 aaKnown RBP22.47■■□□□ 1.19
CCDC40-206ENST00000572083 ZDHHC14Q8IZN3 488 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 VPS52Q8N1B4 723 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 MRPL9Q9BYD2 267 aaKnown RBP22.47■■□□□ 1.19
CCDC40-206ENST00000572083 ZBP1Q9H171 429 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 GLT8D2Q9H1C3 349 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 DZANK1Q9NVP4 752 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 SAMM50Q9Y512 469 aa22.47■■□□□ 1.19
CCDC40-206ENST00000572083 DENND4AQ7Z401 1863 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 A0A0U1RQF3 1178 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 GOLGA8AA7E2F4 631 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 GOLGA8BA8MQT2 603 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 CSDE1O75534 798 aaKnown RBP22.46■■□□□ 1.19
CCDC40-206ENST00000572083 CYP3A4P08684 503 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 CWF19L1Q69YN2 538 aaKnown RBP22.46■■□□□ 1.19
CCDC40-206ENST00000572083 TMEM87AQ8NBN3 555 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 FLCNQ8NFG4 579 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 FAM167AQ96KS9 214 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 WDR87Q6ZQQ6 2873 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 FAM186AA6NE01 2351 aa22.46■■□□□ 1.19
CCDC40-206ENST00000572083 EOMESO95936 686 aa22.45■■□□□ 1.18
CCDC40-206ENST00000572083 DARSP14868 501 aaKnown RBP22.45■■□□□ 1.18
CCDC40-206ENST00000572083 BMS1Q14692 1282 aaKnown RBP22.45■■□□□ 1.18
CCDC40-206ENST00000572083 PRR16Q569H4 304 aa22.45■■□□□ 1.18
CCDC40-206ENST00000572083 ATAT1Q5SQI0 421 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms