RNA–Protein interactions for RNA: ENST00000571252.2

PCDHGA4-201, Transcript of protocadherin gamma subfamily A, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA4, Length 4,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4-201ENST00000571252 PKN1Q16512 942 aa11.98□□□□□ -0.49
PCDHGA4-201ENST00000571252 CASC4Q6P4E1 433 aa11.98□□□□□ -0.49
PCDHGA4-201ENST00000571252 FAM196AQ6ZSG2 479 aa11.98□□□□□ -0.49
PCDHGA4-201ENST00000571252 CCHCR1Q8TD31 782 aa11.98□□□□□ -0.49
PCDHGA4-201ENST00000571252 GOLPH3Q9H4A6 298 aa11.98□□□□□ -0.49
PCDHGA4-201ENST00000571252 KBTBD4Q9NVX7 518 aa11.98□□□□□ -0.49
PCDHGA4-201ENST00000571252 CSADQ9Y600 493 aa11.98□□□□□ -0.49
PCDHGA4-201ENST00000571252 PHRF1Q9P1Y6 1649 aaKnown RBP11.98□□□□□ -0.49
PCDHGA4-201ENST00000571252 BAG2O95816 211 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 TMOD1P28289 359 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 DRP2Q13474 957 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 NAB2Q15742 525 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 ZNF449Q6P9G9 518 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 FAM47EQ6ZV65 393 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 C3orf67Q6ZVT6 689 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 FRMD5Q7Z6J6 570 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 TRIM11Q96F44 468 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 THOC1Q96FV9 657 aaKnown RBP11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 VCX3BQ9H321 246 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 FTLP02792 175 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 HNRNPH1P31943 449 aaKnown RBP11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 CHRNA3P32297 505 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 MYO1EQ12965 1108 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 BYSLQ13895 437 aaKnown RBP11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 HADHQ16836 314 aaKnown RBP11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 CCDC14Q49A88 953 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 FIGNQ5HY92 759 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 ZNF746Q6NUN9 644 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 PPP1R18Q6NYC8 613 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 FAM20AQ96MK3 541 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 CFAP57Q96MR6 1250 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 KCPQ6ZWJ8 1503 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 PLEKHG2Q9H7P9 1386 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 A0A0U1RQJ8 604 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 GOLGA8IPA6NC78 632 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 GOLGA8JA6NMD2 632 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 SGK1O00141 431 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 FAM107AO95990 144 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 GCLMP48507 274 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 LRIG3Q6UXM1 1119 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 SRRM1Q8IYB3 904 aaKnown RBP11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 ADGRF4Q8IZF3 695 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 USP38Q8NB14 1042 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 CCPG1Q9ULG6 757 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 ZNF142P52746 1687 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 ARHGAP42A6NI28 874 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 PHF20L1A8MW92 1017 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 TRIM49P0CI25 452 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 TRIM49CP0CI26 452 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 PRLRP16471 622 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 GALCP54803 685 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 LRRC14Q15048 493 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 TMEM51Q9NW97 253 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 PI4KBQ9UBF8 816 aa11.97□□□□□ -0.49
PCDHGA4-201ENST00000571252 NPHP3-ACAD11A0A0J9YXS1 232 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 SLC9A1P19634 815 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 PTGISQ16647 500 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 QRICH1Q2TAL8 776 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 TRIM51Q9BSJ1 452 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 SSX2IPQ9Y2D8 614 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 TNS2Q63HR2 1409 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 TCP10L2B9ZVM9 353 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 SERPINB2P05120 415 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 BRAFP15056 766 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 RXRBP28702 533 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 PMS1P54277 932 aaKnown RBP11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 PPP2R5AQ15172 486 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 CCDC137Q6PK04 289 aaKnown RBP11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 CYFIP2Q96F07 1278 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 CSRNP1Q96S65 589 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 SPATS2LQ9NUQ6 558 aaKnown RBP11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 ARHGAP20Q9P2F6 1191 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 ANAPC7Q9UJX3 599 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 PCDHB4Q9Y5E5 795 aa11.96□□□□□ -0.49
PCDHGA4-201ENST00000571252 A0A087X0T9 212 aa11.96□□□□□ -0.5
PCDHGA4-201ENST00000571252 FAM228BP0C875 321 aa11.96□□□□□ -0.5
PCDHGA4-201ENST00000571252 PIK3CAP42336 1068 aa11.96□□□□□ -0.5
PCDHGA4-201ENST00000571252 MAP7D1Q3KQU3 841 aa11.96□□□□□ -0.5
PCDHGA4-201ENST00000571252 CNOT8Q9UFF9 292 aaKnown RBP11.96□□□□□ -0.5
PCDHGA4-201ENST00000571252 LCMT1Q9UIC8 334 aa11.96□□□□□ -0.5
PCDHGA4-201ENST00000571252 ADAMTSL3P82987 1691 aa11.96□□□□□ -0.5
PCDHGA4-201ENST00000571252 SOX5P35711 763 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 YWHAGP61981 247 aaKnown RBP eCLIP11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 TTBK2Q6IQ55 1244 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 FOXR1Q6PIV2 292 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 ISCUQ9H1K1 167 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 MRPL47Q9HD33 250 aaKnown RBP11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 HAUS2Q9NVX0 235 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 ALS2Q96Q42 1657 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 CRYBG1Q9Y4K1 1723 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 PDXKO00764 312 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 INHBAP08476 426 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 RNASELQ05823 741 aaKnown RBP11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 DHX34Q14147 1143 aaKnown RBP11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 EAPPQ56P03 285 aaPredicted RBP11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 PNMA2Q9UL42 364 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 LOC102724159A0A0B4J2E5 919 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 WDR91A4D1P6 747 aa11.95□□□□□ -0.5
PCDHGA4-201ENST00000571252 LRRC10BA6NIK2 292 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms