RNA–Protein interactions for RNA: ENST00000570606.5

SMG6-204, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-204ENST00000570606 SMARCA1P28370 1054 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 ADAM17P78536 824 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 MRPS6P82932 125 aaKnown RBP7.42□□□□□ -1.22
SMG6-204ENST00000570606 MGAT3Q09327 533 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 NR5A1Q13285 461 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 BTG3Q14201 252 aaPredicted RBP7.42□□□□□ -1.22
SMG6-204ENST00000570606 LPIN1Q14693 890 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 SYNE3Q6ZMZ3 975 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 TSHZ1Q6ZSZ6 1077 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 TMTC3Q6ZXV5 915 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 SND1Q7KZF4 910 aaKnown RBP eCLIP7.42□□□□□ -1.22
SMG6-204ENST00000570606 RPAINQ86UA6 219 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 DNAJB3Q8WWF6 145 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 PABPC5Q96DU9 382 aaKnown RBP7.42□□□□□ -1.22
SMG6-204ENST00000570606 UIMC1Q96RL1 719 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 LRRC2Q9BYS8 371 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 SMARCAD1Q9H4L7 1026 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 AZI2Q9H6S1 392 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 JPH1Q9HDC5 661 aaPredicted RBP7.42□□□□□ -1.22
SMG6-204ENST00000570606 ANO2Q9NQ90 1003 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 CLDND1Q9NY35 253 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 RBM19Q9Y4C8 960 aaKnown RBP7.42□□□□□ -1.22
SMG6-204ENST00000570606 CDY2AQ9Y6F7 541 aa7.42□□□□□ -1.22
SMG6-204ENST00000570606 FNDC1Q4ZHG4 1894 aaPredicted RBP7.41□□□□□ -1.22
SMG6-204ENST00000570606 WDR81Q562E7 1941 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 GSTTP1A0A1W2PQM5 241 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 RRN3P2A6NIE6 340 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 TMEM229AB2RXF0 380 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 PI4K2BG5E9Z4 385 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 SLC27A2O14975 620 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 ATP9AO75110 1047 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 RPLP2P05387 115 aaKnown RBP7.41□□□□□ -1.22
SMG6-204ENST00000570606 RB1P06400 928 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 ITGB5P18084 799 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 CD52P31358 61 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 LIFRP42702 1097 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 ADCY7P51828 1080 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 NAPAP54920 295 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 CLUL1Q15846 466 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 FBXO47Q5MNV8 452 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 CREB3L3Q68CJ9 461 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 CCDC116Q8IYX3 515 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 NEK9Q8TD19 979 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 PPP2R3CQ969Q6 453 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 SDF4Q9BRK5 362 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 LSG1Q9H089 658 aaKnown RBP7.41□□□□□ -1.22
SMG6-204ENST00000570606 LMAN2LQ9H0V9 348 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 CD320Q9NPF0 282 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 C11orf16Q9NQ32 467 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 JADE2Q9NQC1 790 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 CYLDQ9NQC7 956 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 ZNF358Q9NW07 568 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 SLC9A2Q9UBY0 812 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 PCDHA6Q9UN73 950 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 PCDHA8Q9Y5H6 950 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 TRPV2Q9Y5S1 764 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 UBIAD1Q9Y5Z9 338 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 CNTNAP5Q8WYK1 1306 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 C5orf42Q9H799 3197 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 ZNF318Q5VUA4 2279 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 ZDBF2Q9HCK1 2354 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 PLXNA4Q9HCM2 1894 aa7.41□□□□□ -1.22
SMG6-204ENST00000570606 MBLAC1A4D2B0 266 aaPredicted RBP7.4□□□□□ -1.22
SMG6-204ENST00000570606 C5orf67F2Z3F1 127 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 GRM6O15303 877 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 NCK2O43639 380 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 PRMT3O60678 531 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 ALADP13716 330 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 INSRRP14616 1297 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 BMPR1AP36894 532 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 SCNN1AP37088 669 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 TMEM62Q0P6H9 643 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 PAK2Q13177 524 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 PAN2Q504Q3 1202 aaKnown RBP7.4□□□□□ -1.22
SMG6-204ENST00000570606 PPP1R26Q5T8A7 1209 aaPredicted RBP7.4□□□□□ -1.22
SMG6-204ENST00000570606 IER5Q5VY09 327 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 WWC2Q6AWC2 1192 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 TAS1R3Q7RTX0 852 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 NPAS4Q8IUM7 802 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 FANCBQ8NB91 859 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.4□□□□□ -1.22
SMG6-204ENST00000570606 TSEN2Q8NCE0 465 aaKnown RBP7.4□□□□□ -1.22
SMG6-204ENST00000570606 TRAPPC12Q8WVT3 735 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 LINC01599Q8WXQ3 324 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 TNPO1Q92973 898 aaKnown RBP7.4□□□□□ -1.22
SMG6-204ENST00000570606 ZBTB10Q96DT7 871 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 PGBD1Q96JS3 809 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 POP1Q99575 1024 aaKnown RBP7.4□□□□□ -1.22
SMG6-204ENST00000570606 ESYT1Q9BSJ8 1104 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 FTHL17Q9BXU8 183 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 RC3H2Q9HBD1 1191 aaKnown RBP7.4□□□□□ -1.22
SMG6-204ENST00000570606 RBM28Q9NW13 759 aaKnown RBP7.4□□□□□ -1.22
SMG6-204ENST00000570606 TCEAL9Q9UHQ7 104 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 LRFN2Q9ULH4 789 aa7.4□□□□□ -1.22
SMG6-204ENST00000570606 NAP1L2Q9ULW6 460 aaPredicted RBP7.4□□□□□ -1.22
SMG6-204ENST00000570606 NFASCO94856 1347 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 GOLGA8AA7E2F4 631 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 GOLGA8BA8MQT2 603 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 PRR33A8MZF0 331 aa7.39□□□□□ -1.23
SMG6-204ENST00000570606 hCG_1984214I3L0E3 225 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms