RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 SEPT9Q9UHD8 586 aaPredicted RBP6.6□□□□□ -1.35
CYLD-216ENST00000569891 ZNF215Q9UL58 517 aaPredicted RBP6.6□□□□□ -1.35
CYLD-216ENST00000569891 PYCARDQ9ULZ3 195 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 MANSC4A6NHS7 340 aaPredicted RBP6.6□□□□□ -1.35
CYLD-216ENST00000569891 ADAMTS3O15072 1205 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 ASAP2O43150 1006 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 TACC1O75410 805 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 ITGB5P18084 799 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 LRMPQ12912 555 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 KYAT1Q16773 422 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 C12orf56Q8IXR9 622 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 KCNF1Q9H3M0 494 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 ZNF408Q9H9D4 720 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 VTA1Q9NP79 307 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 MGAMO43451 1857 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 ASTN2O75129 1339 aaPredicted RBP6.6□□□□□ -1.35
CYLD-216ENST00000569891 IGSF9BQ9UPX0 1349 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 FERP16591 822 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 TMOD1P28289 359 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 AP3M2P53677 418 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 CKAP4Q07065 602 aaKnown RBP6.6□□□□□ -1.35
CYLD-216ENST00000569891 NCBP1Q09161 790 aaKnown RBP6.6□□□□□ -1.35
CYLD-216ENST00000569891 ASIC2Q16515 512 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 PRAMEF18Q5VWM3 479 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 METTL7BQ6UX53 244 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 DUSP9Q99956 384 aaKnown RBP6.6□□□□□ -1.35
CYLD-216ENST00000569891 NUDT12Q9BQG2 462 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 SEMA6BQ9H3T3 888 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 GABBR1Q9UBS5 961 aa6.6□□□□□ -1.35
CYLD-216ENST00000569891 EPN1Q9Y6I3 576 aaPredicted RBP6.6□□□□□ -1.35
CYLD-216ENST00000569891 SSU72P8A0A1W2PR75 194 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 PBX1P40424 430 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 RARRES1P49788 294 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 LAMC2Q13753 1193 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 ZNF720Q7Z2F6 126 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 CEP112Q8N8E3 955 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 TC2NQ8N9U0 490 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 XXYLT1Q8NBI6 393 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 SCFD1Q8WVM8 642 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 SMARCAD1Q9H4L7 1026 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 PLCB1Q9NQ66 1216 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 TRMT1Q9NXH9 659 aaKnown RBP6.59□□□□□ -1.35
CYLD-216ENST00000569891 DIS3Q9Y2L1 958 aaKnown RBP6.59□□□□□ -1.35
CYLD-216ENST00000569891 CCL15-CCL14A0A0B4J2E2 113 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 CTAGE9A4FU28 777 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 EML1O00423 815 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 ADKP55263 362 aaKnown RBP6.59□□□□□ -1.35
CYLD-216ENST00000569891 ACTR2P61160 394 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 GNG11P61952 73 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 RAD51AP2Q09MP3 1159 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 MXD4Q14582 209 aaPredicted RBP6.59□□□□□ -1.35
CYLD-216ENST00000569891 LRRC41Q15345 812 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 CLUL1Q15846 466 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 CCL15Q16663 113 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 TMEM132AQ24JP5 1023 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 DCAF17Q5H9S7 520 aaPredicted RBP6.59□□□□□ -1.35
CYLD-216ENST00000569891 LDLRAD1Q5T700 205 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 SEPT14Q6ZU15 432 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 ZNF467Q7Z7K2 595 aaPredicted RBP6.59□□□□□ -1.35
CYLD-216ENST00000569891 MYRIPQ8NFW9 859 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 GLG1Q92896 1179 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 PPP1R13BQ96KQ4 1090 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 P2RX7Q99572 595 aaKnown RBP6.59□□□□□ -1.35
CYLD-216ENST00000569891 DNAJC7Q99615 494 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 IMPG2Q9BZV3 1241 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 TMX1Q9H3N1 280 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 FBXL5Q9UKA1 691 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 SERPING1P05155 500 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 ERCC3P19447 782 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 SREBF2Q12772 1141 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 B3GNT9Q6UX72 402 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 KCNK18Q7Z418 384 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 DPP9Q86TI2 863 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 CCDC155Q8N6L0 562 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 BBXQ8WY36 941 aaPredicted RBP6.59□□□□□ -1.35
CYLD-216ENST00000569891 RPGRIP1Q96KN7 1286 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 RUSC1Q9BVN2 902 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 HSD3B7Q9H2F3 369 aa6.59□□□□□ -1.35
CYLD-216ENST00000569891 UQCRHLA0A096LP55 91 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 MAGEB2O15479 319 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 PRPF6O94906 941 aaKnown RBP6.59□□□□□ -1.36
CYLD-216ENST00000569891 OATP04181 439 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 UQCRHP07919 91 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 GTF2H1P32780 548 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 STAT1P42224 750 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 MATR3P43243 847 aaKnown RBP eCLIP6.59□□□□□ -1.36
CYLD-216ENST00000569891 ERVK-9P63128 1117 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 ERVK-24P63145 666 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 MRPS9P82933 396 aaKnown RBP6.59□□□□□ -1.36
CYLD-216ENST00000569891 SWSAP1Q6NVH7 229 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 ENOSF1Q7L5Y1 443 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 HAUS6Q7Z4H7 955 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 TRIM59Q8IWR1 403 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 ZC3H3Q8IXZ2 948 aaKnown RBP6.59□□□□□ -1.36
CYLD-216ENST00000569891 CYP2W1Q8TAV3 490 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 WNK4Q96J92 1243 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 FNBP1Q96RU3 617 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 LSM14BQ9BX40 385 aaKnown RBP6.59□□□□□ -1.36
CYLD-216ENST00000569891 DNAI1Q9UI46 699 aa6.59□□□□□ -1.36
CYLD-216ENST00000569891 EIF3CLB5ME19 914 aaKnown RBP6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms