RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782	TIGD5	Q53EQ6	642 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	EARS2	Q5JPH6	523 aa	Known RBP	11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	TJAP1	Q5JTD0	557 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	ZNF410	Q86VK4	478 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	PSPC1	Q8WXF1	523 aa	Known RBP	11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	TNFRSF25	Q93038	417 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	HLA-C	Q95604	372 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	PPP2R3C	Q969Q6	453 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	DYDC2	Q96IM9	177 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	PLVAP	Q9BX97	442 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	CDHR5	Q9HBB8	845 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	PCDHB12	Q9Y5F1	795 aa		11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	COL4A4	P53420	1690 aa	Predicted RBP	11.59	□□□□□ -0.55
UBR1-207	ENST00000568782	FAM205C	A6NFA0	338 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	EPOP	A6NHQ4	379 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	ARHGEF15	O94989	841 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	DARS	P14868	501 aa	Known RBP	11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	BMPR1A	P36894	532 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	CTTN	Q14247	550 aa	Known RBP	11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	PAN2	Q504Q3	1202 aa	Known RBP	11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	NAALADL2	Q58DX5	795 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	PLA2G4F	Q68DD2	849 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	MCTP1	Q6DN14	999 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	ANO5	Q75V66	913 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	FAM228A	Q86W67	206 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	NOSTRIN	Q8IVI9	506 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	MRPL38	Q96DV4	380 aa	Known RBP	11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	NLRP4	Q96MN2	994 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	KIF2C	Q99661	725 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	MTR	Q99707	1265 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	EIF2AK1	Q9BQI3	630 aa	Known RBP	11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	SH2D3A	Q9BRG2	576 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	LMAN2L	Q9H0V9	348 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	ELAC1	Q9H777	363 aa	Known RBP	11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	CHST12	Q9NRB3	414 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	TMEM161A	Q9NX61	479 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	STK24	Q9Y6E0	443 aa		11.58	□□□□□ -0.56
UBR1-207	ENST00000568782	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	COL4A6	Q14031	1691 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782		A0A087WZ62	844 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	IGKV6-21	A0A0C4DH24	114 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	TBKBP1	A7MCY6	615 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	EOMES	O95936	686 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	OR52Z1	P0C646	297 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	TEC	P42680	631 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	TFDP1	Q14186	410 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	MXD4	Q14582	209 aa	Predicted RBP	11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	ZNF174	Q15697	407 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	CSPP1	Q1MSJ5	1256 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	TTC38	Q5R3I4	469 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	HAUS3	Q68CZ6	603 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	TWF2	Q6IBS0	349 aa	Known RBP	11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	CATSPER4	Q7RTX7	472 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	LINC01465	Q8N7H1	131 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	TMEM40	Q8WWA1	233 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	ZNF689	Q96CS4	500 aa	Predicted RBP	11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	ZNF668	Q96K58	619 aa	Predicted RBP	11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	ASB2	Q96Q27	587 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	ADAMTS10	Q9H324	1103 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	TMX1	Q9H3N1	280 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	ANKEF1	Q9NU02	776 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	RGL1	Q9NZL6	768 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	SMC3	Q9UQE7	1217 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	COL4A3BP	Q9Y5P4	624 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	ARID2	Q68CP9	1835 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	CHD9	Q3L8U1	2897 aa		11.57	□□□□□ -0.56
UBR1-207	ENST00000568782	CHD7	Q9P2D1	2997 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	EYS	Q5T1H1	3165 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	CARNS1	A5YM72	827 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	TMEM150B	A6NC51	233 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782		C9IYK1	514 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	C5orf67	F2Z3F1	127 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	NCK2	O43639	380 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	DGAT1	O75907	488 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	ERLIN2	O94905	339 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	SLITRK3	O94933	977 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	SRGAP2C	P0DJJ0	459 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	XRCC6	P12956	609 aa	Known RBP eCLIP	11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	NPEPPS	P55786	919 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	ST3GAL1	Q11201	340 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	BMS1	Q14692	1282 aa	Known RBP	11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	EMC2	Q15006	297 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	EP400NL	Q6ZTU2	488 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	SRGAP1	Q7Z6B7	1085 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	RNF169	Q8NCN4	708 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	PRUNE2	Q8WUY3	3088 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	LINC01599	Q8WXQ3	324 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	RSPH1	Q8WYR4	309 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	CLP1	Q92989	425 aa	Known RBP	11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	P2RX5	Q93086	422 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	TMX3	Q96JJ7	454 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	TBC1D32	Q96NH3	1257 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	NACC1	Q96RE7	527 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	CDH23	Q9H251	3354 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	TUFT1	Q9NNX1	390 aa		11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	TCF20	Q9UGU0	1960 aa	Known RBP	11.56	□□□□□ -0.56
UBR1-207	ENST00000568782	LAD1	O00515	517 aa		11.55	□□□□□ -0.56

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