RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 SLC9A9Q8IVB4 645 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 SLC17A8Q8NDX2 589 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 TMEM174Q8WUU8 243 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 CCDC43Q96MW1 224 aaKnown RBP25.47■■□□□ 1.67
LINC00543-201ENST00000567234 LSM14BQ9BX40 385 aaKnown RBP25.47■■□□□ 1.67
LINC00543-201ENST00000567234 PLCB1Q9NQ66 1216 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 DMAC2Q9NW81 257 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 MRFAP1Q9Y605 127 aa25.47■■□□□ 1.67
LINC00543-201ENST00000567234 GTPBP10A4D1E9 387 aaKnown RBP25.46■■□□□ 1.67
LINC00543-201ENST00000567234 LCA5LO95447 670 aa25.46■■□□□ 1.67
LINC00543-201ENST00000567234 GOLGA1Q92805 767 aa25.46■■□□□ 1.67
LINC00543-201ENST00000567234 BORCS6Q96GS4 357 aa25.46■■□□□ 1.67
LINC00543-201ENST00000567234 DRC1Q96MC2 740 aa25.46■■□□□ 1.67
LINC00543-201ENST00000567234 ST6GALNAC4Q9H4F1 302 aa25.46■■□□□ 1.67
LINC00543-201ENST00000567234 PFASO15067 1338 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 A0A0G2JLL6 359 aaPredicted RBP25.45■■□□□ 1.66
LINC00543-201ENST00000567234 SSU72P8A0A1W2PR75 194 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 CXCL11O14625 94 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 MAP2K7O14733 419 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 RGS20O76081 388 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 PLS3P13797 630 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 MAPK8IP2Q13387 824 aaPredicted RBP25.45■■□□□ 1.66
LINC00543-201ENST00000567234 UGCGQ16739 394 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 TREML2Q5T2D2 321 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 PRRT2Q7Z6L0 340 aaPredicted RBP25.45■■□□□ 1.66
LINC00543-201ENST00000567234 ERO1BQ86YB8 467 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 RIOX2Q8IUF8 465 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 ANKRD13AQ8IZ07 590 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 EHBP1Q8NDI1 1231 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 CARD6Q9BX69 1037 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 TMEM206Q9H813 350 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 ARHGAP20Q9P2F6 1191 aa25.45■■□□□ 1.66
LINC00543-201ENST00000567234 VGLL3A8MV65 326 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 SPATA31C2B4DYI2 1134 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 CLIC2O15247 247 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 KRT86O43790 486 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 ACTN2P35609 894 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 TNNT3P45378 269 aaPredicted RBP25.44■■□□□ 1.66
LINC00543-201ENST00000567234 SPA17Q15506 151 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 KIAA1328Q86T90 577 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 AGPAT3Q9NRZ7 376 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 CTAGE9A4FU28 777 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 CASP4P49662 377 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 LRRN4CLQ8ND94 238 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 ATP6V0A1Q93050 837 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 SLC35C1Q96A29 364 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 FUT8Q9BYC5 575 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 TSGA10Q9BZW7 698 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 GANQ9H2C0 597 aa25.44■■□□□ 1.66
LINC00543-201ENST00000567234 MYO1CO00159 1063 aa25.43■■□□□ 1.66
LINC00543-201ENST00000567234 ICAM3P32942 547 aa25.43■■□□□ 1.66
LINC00543-201ENST00000567234 SNRPFP62306 86 aaKnown RBP25.43■■□□□ 1.66
LINC00543-201ENST00000567234 OTUD6AQ7L8S5 288 aa25.43■■□□□ 1.66
LINC00543-201ENST00000567234 FAM186BQ8IYM0 893 aa25.43■■□□□ 1.66
LINC00543-201ENST00000567234 SLC35F6Q8N357 371 aa25.43■■□□□ 1.66
LINC00543-201ENST00000567234 FBXL5Q9UKA1 691 aa25.43■■□□□ 1.66
LINC00543-201ENST00000567234 ARID2Q68CP9 1835 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 MYH9P35579 1960 aaKnown RBP25.42■■□□□ 1.66
LINC00543-201ENST00000567234 K7ENM7 598 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 USO1O60763 962 aaKnown RBP25.42■■□□□ 1.66
LINC00543-201ENST00000567234 EIF3JO75822 258 aaKnown RBP25.42■■□□□ 1.66
LINC00543-201ENST00000567234 PSAPP07602 524 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 VAV2P52735 878 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 CCDC122Q5T0U0 273 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 SFMBT2Q5VUG0 894 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 SRLQ86TD4 932 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 JAKMIP2Q96AA8 810 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 OTUD5Q96G74 571 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 CRACR2AQ9BSW2 395 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 MYO6Q9UM54 1294 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 DOCK5Q9H7D0 1870 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 SPDYE5A6NIY4 337 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 BACH1O14867 736 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 IRF6O14896 467 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 POLR3GO15318 223 aaPredicted RBP25.42■■□□□ 1.66
LINC00543-201ENST00000567234 ABL1P00519 1130 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 KIF11P52732 1056 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 POLR2FP61218 127 aaKnown RBP25.42■■□□□ 1.66
LINC00543-201ENST00000567234 STXBP2Q15833 593 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 EXOC3L4Q17RC7 722 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 XKR9Q5GH70 373 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 ARMC9Q7Z3E5 817 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 C12orf56Q8IXR9 622 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 NAPGQ99747 312 aaPredicted RBP25.42■■□□□ 1.66
LINC00543-201ENST00000567234 JPH1Q9HDC5 661 aaPredicted RBP25.42■■□□□ 1.66
LINC00543-201ENST00000567234 SLC9A2Q9UBY0 812 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 FRMD4BQ9Y2L6 1034 aa25.42■■□□□ 1.66
LINC00543-201ENST00000567234 SERPING1P05155 500 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 EIF4A3P38919 411 aaKnown RBP25.41■■□□□ 1.66
LINC00543-201ENST00000567234 PPP2R5AQ15172 486 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 SLC9C1Q4G0N8 1177 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 DPY19L2P1Q6NXN4 242 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 LEKR1Q6ZMV7 388 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 GBP6Q6ZN66 633 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 SYCP3Q8IZU3 236 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 ACCSQ96QU6 501 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 DEF6Q9H4E7 631 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 NLRC4Q9NPP4 1024 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 AIPL1Q9NZN9 384 aa25.41■■□□□ 1.66
LINC00543-201ENST00000567234 GUCA1BQ9UMX6 200 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms