RNA–Protein interactions for RNA: ENST00000567195.5

COMMD4-217, Transcript of COMM domain containing 4, humanhuman

TSL 2 BASIC

Gene COMMD4, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-217ENST00000567195 TMEM40Q8WWA1 233 aa17.46■□□□□ 0.39
COMMD4-217ENST00000567195 PSPC1Q8WXF1 523 aaKnown RBP17.46■□□□□ 0.39
COMMD4-217ENST00000567195 TMEM143Q96AN5 459 aa17.46■□□□□ 0.39
COMMD4-217ENST00000567195 ZNF668Q96K58 619 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-217ENST00000567195 GCOM2Q9BZD3 368 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-217ENST00000567195 INO80BQ9C086 356 aaPredicted RBP17.46■□□□□ 0.39
COMMD4-217ENST00000567195 ATP6V0A4Q9HBG4 840 aa17.46■□□□□ 0.39
COMMD4-217ENST00000567195 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.45■□□□□ 0.38
COMMD4-217ENST00000567195 ARHGEF35A5YM69 484 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 RBAK-RBAKDNI3L0D1 243 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 ENPP3O14638 875 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 ASAP2O43150 1006 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 NKX2-4Q9H2Z4 354 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 ZNF576Q9H609 170 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 ERVK-5Q9HDB9 667 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 ST3GAL5Q9UNP4 418 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 KIAA1024Q9UPX6 916 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 STXBP5LQ9Y2K9 1186 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 COL4A3BPQ9Y5P4 624 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 MICAL3Q7RTP6 2002 aa17.45■□□□□ 0.38
COMMD4-217ENST00000567195 GBF1Q92538 1859 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 A0A087WZ62 844 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 PP2D1A8MPX8 630 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 USO1O60763 962 aaKnown RBP17.44■□□□□ 0.38
COMMD4-217ENST00000567195 UPP2O95045 317 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 GJB5O95377 273 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 DARSP14868 501 aaKnown RBP17.44■□□□□ 0.38
COMMD4-217ENST00000567195 CDC25AP30304 524 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 FAM117BQ6P1L5 589 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 FAM173BQ6P4H8 233 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 TMCO2Q7Z6W1 182 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-217ENST00000567195 FAM228AQ86W67 206 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 PRPF31Q8WWY3 499 aaKnown RBP17.44■□□□□ 0.38
COMMD4-217ENST00000567195 TOP1MTQ969P6 601 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 AK8Q96MA6 479 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 NLRP4Q96MN2 994 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 FAM161BQ96MY7 647 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 RAD9AQ99638 391 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 FDXACB1Q9BRP7 624 aaPredicted RBP17.44■□□□□ 0.38
COMMD4-217ENST00000567195 DDX19AQ9NUU7 478 aaKnown RBP17.44■□□□□ 0.38
COMMD4-217ENST00000567195 DNM3Q9UQ16 869 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 YBX2Q9Y2T7 364 aaKnown RBP17.44■□□□□ 0.38
COMMD4-217ENST00000567195 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 LOXHD1Q8IVV2 1947 aa17.44■□□□□ 0.38
COMMD4-217ENST00000567195 DENND3A2RUS2 1198 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 MYOGP15173 224 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 ZSCAN20P17040 1043 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-217ENST00000567195 MXD4Q14582 209 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-217ENST00000567195 ZRSR1Q15695 479 aaKnown RBP17.43■□□□□ 0.38
COMMD4-217ENST00000567195 ECM1Q16610 540 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 PPP2R2DQ66LE6 453 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 KSR1Q8IVT5 923 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 MCPH1Q8NEM0 835 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 CDK5RAP3Q96JB5 506 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 ZNF396Q96N95 335 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-217ENST00000567195 NT5C3AQ9H0P0 336 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 TSPYL2Q9H2G4 693 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-217ENST00000567195 XPNPEP1Q9NQW7 623 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 RNF216Q9NWF9 866 aaPredicted RBP17.43■□□□□ 0.38
COMMD4-217ENST00000567195 INSL6Q9Y581 213 aa17.43■□□□□ 0.38
COMMD4-217ENST00000567195 ARID2Q68CP9 1835 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 SRGAP2CP0DJJ0 459 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 ZSCAN22P10073 491 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 SFPQP23246 707 aaKnown RBP eCLIP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 LONP1P36776 959 aaKnown RBP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 UBA7P41226 1012 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 CEBPZQ03701 1054 aaKnown RBP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 LAMTOR4Q0VGL1 99 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 TFDP1Q14186 410 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 FOXD4L5Q5VV16 416 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 PADI6Q6TGC4 694 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 RTN4RL1Q86UN2 441 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 CABP7Q86V35 215 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 KCTD17Q8N5Z5 321 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 FOXD4L4Q8WXT5 416 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 GAS2L1Q99501 681 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 MMTAG2Q9BU76 263 aaKnown RBP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 BHMT2Q9H2M3 363 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 TTYH1Q9H313 450 aaPredicted RBP17.42■□□□□ 0.38
COMMD4-217ENST00000567195 TMX1Q9H3N1 280 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 C1orf112Q9NSG2 853 aa17.42■□□□□ 0.38
COMMD4-217ENST00000567195 SLC26A4O43511 780 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 CA3P07451 260 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 STAG3L1P0CL83 205 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 PTPAQ15257 358 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 MAEAQ7L5Y9 396 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 SRGAP1Q7Z6B7 1085 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 RNF149Q8NC42 400 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 LINC01599Q8WXQ3 324 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 CALML4Q96GE6 196 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 USP28Q96RU2 1077 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 YME1L1Q96TA2 773 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 ADAM2Q99965 735 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 LRFN2Q9ULH4 789 aa17.41■□□□□ 0.38
COMMD4-217ENST00000567195 E9PMD0 336 aa17.4■□□□□ 0.38
COMMD4-217ENST00000567195 CSDE1O75534 798 aaKnown RBP17.4■□□□□ 0.38
COMMD4-217ENST00000567195 EYA4O95677 639 aa17.4■□□□□ 0.38
COMMD4-217ENST00000567195 F13A1P00488 732 aa17.4■□□□□ 0.38
COMMD4-217ENST00000567195 CYP11B2P19099 503 aa17.4■□□□□ 0.38
COMMD4-217ENST00000567195 FGFR4P22455 802 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms