RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 KRT12Q99456 494 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 MKNK1Q9BUB5 465 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 ISCUQ9H1K1 167 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 TUFT1Q9NNX1 390 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 GGA3Q9NZ52 723 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 NFU1Q9UMS0 254 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 ASTN1O14525 1302 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
CMTM3-213ENST00000566756 FAM86B1E9PN63 330 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 CCDC188H7C350 402 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 MSH4O15457 936 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 TBCAO75347 108 aaKnown RBP18.27■□□□□ 0.52
CMTM3-213ENST00000566756 AKAP3O75969 853 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 FAM86B2P0C5J1 330 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 HSPA9P38646 679 aaKnown RBP18.27■□□□□ 0.52
CMTM3-213ENST00000566756 EFCAB13Q8IY85 973 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 SCYL3Q8IZE3 742 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 SYCE1Q8N0S2 351 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 CASKIN2Q8WXE0 1202 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 SLC35C1Q96A29 364 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 BORCS6Q96GS4 357 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 WDR18Q9BV38 432 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 TAF1DQ9H5J8 278 aaPredicted RBP18.27■□□□□ 0.52
CMTM3-213ENST00000566756 SIX2Q9NPC8 291 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 RNF181Q9P0P0 153 aa18.27■□□□□ 0.52
CMTM3-213ENST00000566756 PHIPQ8WWQ0 1821 aa18.27■□□□□ 0.51
CMTM3-213ENST00000566756 SRRM3A6NNA2 597 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 ZBTB48P10074 688 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 ACTN1P12814 892 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 YBX3P16989 372 aaKnown RBP eCLIP18.26■□□□□ 0.511e-6■■□□□ 12.5
CMTM3-213ENST00000566756 SNAP25P60880 206 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 LRIG3Q6UXM1 1119 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 KDM7AQ6ZMT4 941 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 ARL8AQ96BM9 186 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 ADARB2Q9NS39 739 aaKnown RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 SUCLA2Q9P2R7 463 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 RABGAP1Q9Y3P9 1069 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 OPLAHO14841 1288 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 TRIM66O15016 1216 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 DDNO94850 711 aaPredicted RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 INPP5BP32019 993 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 ZYXQ15942 572 aaKnown RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 USH1GQ495M9 461 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 RASGEF1CQ8N431 466 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 TPCN2Q8NHX9 752 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 CCDC43Q96MW1 224 aaKnown RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 HINFPQ9BQA5 517 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 EIF2AK1Q9BQI3 630 aaKnown RBP18.26■□□□□ 0.51
CMTM3-213ENST00000566756 SEL1LQ9UBV2 794 aa18.26■□□□□ 0.51
CMTM3-213ENST00000566756 ATXN2Q99700 1313 aaKnown RBP18.25■□□□□ 0.51
CMTM3-213ENST00000566756 PGRMC1O00264 195 aaKnown RBP18.25■□□□□ 0.51
CMTM3-213ENST00000566756 KCNK3O14649 394 aa18.25■□□□□ 0.51
CMTM3-213ENST00000566756 RAD51CO43502 376 aa18.25■□□□□ 0.51
CMTM3-213ENST00000566756 PPP1R12BO60237 982 aaPredicted RBP18.25■□□□□ 0.51
CMTM3-213ENST00000566756 H2AFZP0C0S5 128 aa18.25■□□□□ 0.51
CMTM3-213ENST00000566756 GNGT1P63211 74 aa18.25■□□□□ 0.51
CMTM3-213ENST00000566756 MRPS25P82663 173 aaKnown RBP18.25■□□□□ 0.51
CMTM3-213ENST00000566756 H2AFVQ71UI9 128 aa18.25■□□□□ 0.51
CMTM3-213ENST00000566756 PPM1EQ8WY54 764 aa18.25■□□□□ 0.51
CMTM3-213ENST00000566756 AS3MTQ9HBK9 375 aa18.25■□□□□ 0.51
CMTM3-213ENST00000566756 STXBP5LQ9Y2K9 1186 aa18.25■□□□□ 0.51
CMTM3-213ENST00000566756 PARP14Q460N5 1801 aa18.25■□□□□ 0.51
CMTM3-213ENST00000566756 HMGB1P1B2RPK0 211 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-213ENST00000566756 MEIS1O00470 390 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 EBAG9O00559 213 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 FAM153BP0C7A2 387 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 SUPT20HL1Q3ZLR7 823 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 FAM153CQ494X1 144 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 PRPF38AQ8NAV1 312 aaKnown RBP18.24■□□□□ 0.51
CMTM3-213ENST00000566756 PIK3R5Q8WYR1 880 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.24■□□□□ 0.512e-6■■□□□ 14.2
CMTM3-213ENST00000566756 BHMT2Q9H2M3 363 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 FAM153AQ9UHL3 310 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 ZNF233A6NK53 670 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 GCNT3O95395 438 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 CPP00450 1065 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 PSMC2P35998 433 aaKnown RBP18.24■□□□□ 0.51
CMTM3-213ENST00000566756 STAT1P42224 750 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 DCAF17Q5H9S7 520 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-213ENST00000566756 RINT1Q6NUQ1 792 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 SPATS2Q86XZ4 545 aaKnown RBP18.24■□□□□ 0.51
CMTM3-213ENST00000566756 IFT81Q8WYA0 676 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 KLRG1Q96E93 195 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 HSD17B14Q9BPX1 270 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 RUSC1Q9BVN2 902 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 SLITRK6Q9H5Y7 841 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 KCND2Q9NZV8 630 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 GCNT4Q9P109 453 aa18.24■□□□□ 0.51
CMTM3-213ENST00000566756 TTC7AQ9ULT0 858 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-213ENST00000566756 PACSIN2Q9UNF0 486 aaPredicted RBP18.24■□□□□ 0.51
CMTM3-213ENST00000566756 DIS3Q9Y2L1 958 aaKnown RBP18.24■□□□□ 0.51
CMTM3-213ENST00000566756 MRPL11Q9Y3B7 192 aaKnown RBP18.24■□□□□ 0.51
CMTM3-213ENST00000566756 IGLV3-22A0A075B6J6 115 aa18.23■□□□□ 0.51
CMTM3-213ENST00000566756 TGFB1I1O43294 461 aa18.23■□□□□ 0.51
CMTM3-213ENST00000566756 PPP2R5CQ13362 524 aa18.23■□□□□ 0.51
CMTM3-213ENST00000566756 NOL9Q5SY16 702 aaKnown RBP18.23■□□□□ 0.51
CMTM3-213ENST00000566756 STXBP4Q6ZWJ1 553 aa18.23■□□□□ 0.51
CMTM3-213ENST00000566756 BCAS4Q8TDM0 211 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms