RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 HES6Q96HZ4 224 aa15.47■□□□□ 0.07
CDH1-209ENST00000566510 DYDC2Q96IM9 177 aa15.47■□□□□ 0.07
CDH1-209ENST00000566510 TMX4Q9H1E5 349 aaPredicted RBP15.47■□□□□ 0.07
CDH1-209ENST00000566510 SLITRK6Q9H5Y7 841 aa15.47■□□□□ 0.07
CDH1-209ENST00000566510 STXBP5LQ9Y2K9 1186 aa15.47■□□□□ 0.07
CDH1-209ENST00000566510 FRMD4BQ9Y2L6 1034 aa15.47■□□□□ 0.07
CDH1-209ENST00000566510 A0A0A6YYK5 440 aaPredicted RBP15.46■□□□□ 0.07
CDH1-209ENST00000566510 LMNB1P20700 586 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 KCNA4P22459 653 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 HNRNPH1P31943 449 aaKnown RBP15.46■□□□□ 0.07
CDH1-209ENST00000566510 FMO5P49326 533 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 BMT2Q1RMZ1 405 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 ABCB5Q2M3G0 1257 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 EIF1ADQ8N9N8 165 aaKnown RBP15.46■□□□□ 0.07
CDH1-209ENST00000566510 PARVGQ9HBI0 331 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 DCDC2CA8MYV0 355 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 POLRMTO00411 1230 aaKnown RBP15.46■□□□□ 0.07
CDH1-209ENST00000566510 GAP43P17677 238 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 TNFAIP3P21580 790 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 MAGOHP61326 146 aaKnown RBP15.46■□□□□ 0.07
CDH1-209ENST00000566510 CBWD6Q4V339 395 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 CBWD3Q5JTY5 395 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 CBWD5Q5RIA9 395 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 EMC10Q5UCC4 262 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 LRCH2Q5VUJ6 765 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 HS2ST1Q7LGA3 356 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 TMC3Q7Z5M5 1100 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 FAM178BQ8IXR5 827 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 RASGEF1CQ8N431 466 aa15.46■□□□□ 0.07
CDH1-209ENST00000566510 MAGOHBQ96A72 148 aaKnown RBP15.46■□□□□ 0.07
CDH1-209ENST00000566510 POLR3CQ9BUI4 534 aaPredicted RBP15.46■□□□□ 0.07
CDH1-209ENST00000566510 IGSF9BQ9UPX0 1349 aa15.46■□□□□ 0.06
CDH1-209ENST00000566510 ZBTB48P10074 688 aaPredicted RBP15.45■□□□□ 0.06
CDH1-209ENST00000566510 ANXA13P27216 316 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 SYCP3Q8IZU3 236 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 C1orf131Q8NDD1 294 aaKnown RBP15.45■□□□□ 0.06
CDH1-209ENST00000566510 STK33Q9BYT3 514 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 THAP2Q9H0W7 228 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 OLFML3Q9NRN5 406 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 TAS2R14Q9NYV8 317 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 INTUQ9ULD6 942 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 STK24Q9Y6E0 443 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 GTPBP10A4D1E9 387 aaKnown RBP15.45■□□□□ 0.06
CDH1-209ENST00000566510 GMNCA6NCL1 334 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 SLITRK3O94933 977 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 BMP3P12645 472 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 KRT13P13646 458 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 BIRC3Q13489 604 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 ODR4Q5SWX8 454 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 TMEM179Q6ZVK1 233 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 MAEAQ7L5Y9 396 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 RFFLQ8WZ73 363 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 GLG1Q92896 1179 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 CYFIP2Q96F07 1278 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 FMO2Q99518 471 aa15.45■□□□□ 0.06
CDH1-209ENST00000566510 TMEM110-MUSTN1A8MSY1 372 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 GH2P01242 217 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 PPP2R2AP63151 447 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 DR1Q01658 176 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 MCTP2Q6DN12 878 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 SH3BP5LQ7L8J4 393 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 ARHGEF26Q96DR7 871 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.44■□□□□ 0.06
CDH1-209ENST00000566510 FAM114A2Q9NRY5 505 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 TMOD4Q9NZQ9 345 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 NENFQ9UMX5 172 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 ZMYM2Q9UBW7 1377 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 SMIM23A6NLE4 172 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 OPLAHO14841 1288 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 EXOC3O60645 756 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 NPEPPSP55786 919 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 DCAF12L1Q5VU92 463 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 PALB2Q86YC2 1186 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 SLC30A5Q8TAD4 765 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 HOOK2Q96ED9 719 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 BORCS6Q96GS4 357 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 INTS2Q9H0H0 1204 aaKnown RBP15.44■□□□□ 0.06
CDH1-209ENST00000566510 LRRC4CQ9HCJ2 640 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 CNOT8Q9UFF9 292 aaKnown RBP15.44■□□□□ 0.06
CDH1-209ENST00000566510 FAM198AQ9UFP1 575 aa15.44■□□□□ 0.06
CDH1-209ENST00000566510 MYH11P35749 1972 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 LY75O60449 1722 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 GOLGA6L10A0A0M3HER8 536 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 CCDC174Q6PII3 467 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 C1orf186Q6ZWK4 172 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 OTOP1Q7RTM1 612 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 HSD17B14Q9BPX1 270 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 RAB17Q9H0T7 212 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
CDH1-209ENST00000566510 CHORDC1Q9UHD1 332 aaPredicted RBP15.43■□□□□ 0.06
CDH1-209ENST00000566510 TLDC2A0PJX2 215 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 GAS7O60861 476 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 TMEM253P0C7T8 217 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 CIITAP33076 1130 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 USP8P40818 1118 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 PLTPP55058 493 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 MYL7Q01449 175 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 AADACL2Q6P093 401 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 CCDC121Q6ZUS5 278 aa15.43■□□□□ 0.06
CDH1-209ENST00000566510 CABS1Q96KC9 395 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms