RNA–Protein interactions for RNA: ENST00000566286.5

TCF4-232, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-232ENST00000566286 CD248Q9HCU0 757 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 EGFL7Q9UHF1 273 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 NAGPAQ9UK23 515 aa11.93□□□□□ -0.5
TCF4-232ENST00000566286 RFC4P35249 363 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 PRKCIP41743 596 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 CDK8P49336 464 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 ADAM9Q13443 819 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 ENOX2Q16206 610 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 ECM1Q16610 540 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 TRAPPC3LQ5T215 181 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 WLSQ5T9L3 541 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 ALKBH5Q6P6C2 394 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 PEX26Q7Z412 305 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 IRF2BP2Q7Z5L9 587 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 TMC3Q7Z5M5 1100 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 CCDC24Q8N4L8 307 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 OR2W6PQ8NHA6 318 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 TPCN2Q8NHX9 752 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 TATDN2Q93075 761 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 SGSM3Q96HU1 749 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 OSBPL7Q9BZF2 842 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 KCTD10Q9H3F6 313 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 QTRT2Q9H974 415 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 SUCLA2Q9P2R7 463 aaPredicted RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 INTUQ9ULD6 942 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 KIF1CO43896 1103 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 P4HBP07237 508 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 GHRP10912 638 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 GCFC2P16383 781 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 NPEPPSP55786 919 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 COL19A1Q14993 1142 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 CYB5D1Q6P9G0 228 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 ZNF571Q7Z3V5 609 aaPredicted RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 FRMD5Q7Z6J6 570 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 SLFN11Q7Z7L1 901 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 DDX42Q86XP3 938 aaKnown RBP eCLIP11.92□□□□□ -0.5
TCF4-232ENST00000566286 NELFCDQ8IXH7 590 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 FUKQ8N0W3 1084 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 METTL13Q8N6R0 699 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 RAPGEF5Q92565 580 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 CENPTQ96BT3 561 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 NAP1L4Q99733 375 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 AP1M1Q9BXS5 423 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 DDX47Q9H0S4 455 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 DDX25Q9UHL0 483 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 JAG2Q9Y219 1238 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 UTP11Q9Y3A2 253 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 PCDHA2Q9Y5H9 948 aa11.92□□□□□ -0.5
TCF4-232ENST00000566286 MRPL42Q9Y6G3 142 aaKnown RBP11.92□□□□□ -0.5
TCF4-232ENST00000566286 DDX60LQ5H9U9 1706 aaKnown RBP11.91□□□□□ -0.5
TCF4-232ENST00000566286 MAFGO15525 162 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 DAPK3O43293 454 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 SSBP05455 408 aaKnown RBP eCLIP11.91□□□□□ -0.5
TCF4-232ENST00000566286 ZBTB48P10074 688 aaPredicted RBP11.91□□□□□ -0.5
TCF4-232ENST00000566286 UCHL3P15374 230 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 TMOD1P28289 359 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 TM4SF1P30408 202 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 NF2P35240 595 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 NOVP48745 357 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 PPP2R5EQ16537 467 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 KRT71Q3SY84 523 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 ASPRV1Q53RT3 343 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 HERC4Q5GLZ8 1057 aaPredicted RBP11.91□□□□□ -0.5
TCF4-232ENST00000566286 CPLX4Q7Z7G2 160 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 HOOK3Q86VS8 718 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 MAPKAPK5Q8IW41 473 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 SCFD1Q8WVM8 642 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 NEUROG2Q9H2A3 272 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 MCM8Q9UJA3 840 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 TRPC6Q9Y210 931 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 LEMD3Q9Y2U8 911 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 CDK5RAP2Q96SN8 1893 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 PITPNM2Q9BZ72 1349 aa11.91□□□□□ -0.5
TCF4-232ENST00000566286 F8VZ95 297 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 EDIL3O43854 480 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 AFPP02771 609 aaKnown RBP11.9□□□□□ -0.5
TCF4-232ENST00000566286 H2AFZP0C0S5 128 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 SLC8A1P32418 973 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 MAGOHP61326 146 aaKnown RBP11.9□□□□□ -0.5
TCF4-232ENST00000566286 XRCC4Q13426 336 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 NFIXQ14938 502 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 NBPF9Q3BBW0 867 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 H2AFVQ71UI9 128 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 MAGOHBQ96A72 148 aaKnown RBP11.9□□□□□ -0.5
TCF4-232ENST00000566286 CEP95Q96GE4 821 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 EPAS1Q99814 870 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 RAB17Q9H0T7 212 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 DONSONQ9NYP3 566 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 ARMCX3Q9UH62 379 aaPredicted RBP11.9□□□□□ -0.5
TCF4-232ENST00000566286 AMACRQ9UHK6 382 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 SAP30BPQ9UHR5 308 aaKnown RBP11.9□□□□□ -0.5
TCF4-232ENST00000566286 HDAC9Q9UKV0 1011 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 TTC7AQ9ULT0 858 aaPredicted RBP11.9□□□□□ -0.5
TCF4-232ENST00000566286 PCDHA12Q9UN75 941 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 G3BP2Q9UN86 482 aaKnown RBP11.9□□□□□ -0.5
TCF4-232ENST00000566286 DIS3Q9Y2L1 958 aaKnown RBP11.9□□□□□ -0.5
TCF4-232ENST00000566286 EP400Q96L91 3159 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 IRS2Q9Y4H2 1338 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 DNM1LO00429 736 aa11.9□□□□□ -0.5
TCF4-232ENST00000566286 DNAJC8O75937 253 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms