RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 RBM8AQ9Y5S9 174 aaKnown RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 MYH14Q7Z406 1995 aaKnown RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 FAM170AA1A519 330 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 MMP10P09238 476 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 ZNF165P49910 485 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 NR1H2P55055 460 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 SCAND1P57086 179 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 MAP2K1Q02750 393 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 POSTNQ15063 836 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 RTN1Q16799 776 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 INF2Q27J81 1249 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 SV2CQ496J9 727 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 INTS6LQ5JSJ4 861 aaKnown RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 AHCYL2Q96HN2 611 aaKnown RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 SLC2A13Q96QE2 648 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 TTLL2Q9BWV7 592 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 RANBP17Q9H2T7 1088 aaKnown RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 C11orf16Q9NQ32 467 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 DBNLQ9UJU6 430 aaKnown RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 TRAF6Q9Y4K3 522 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 CNTNAP4Q9C0A0 1308 aa11.85□□□□□ -0.51
UBFD1-205ENST00000566136 RPAP1Q9BWH6 1393 aaPredicted RBP11.85□□□□□ -0.51
UBFD1-205ENST00000566136 B4E171 279 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 RPS6KA4O75676 772 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 CHGBP05060 677 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 SMTNP53814 917 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 ERVK-9P63128 1117 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 PTPN11Q06124 597 aaPredicted RBP11.84□□□□□ -0.51
UBFD1-205ENST00000566136 TRIM68Q6AZZ1 485 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 LMBR1LQ6UX01 489 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 PPP1R14CQ8TAE6 165 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 HSH2DQ96JZ2 352 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 GSX2Q9BZM3 304 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 DZANK1Q9NVP4 752 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 LIMCH1Q9UPQ0 1083 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 COL5A3P25940 1745 aaPredicted RBP11.84□□□□□ -0.51
UBFD1-205ENST00000566136 ZNF831Q5JPB2 1677 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 A6NLC8 198 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 PAPLNO95428 1278 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 PARP1P09874 1014 aaKnown RBP11.84□□□□□ -0.51
UBFD1-205ENST00000566136 DCAF7P61962 342 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 ARID5BQ14865 1188 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 CREB3L3Q68CJ9 461 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 FAM160A2Q8N612 972 aaPredicted RBP11.84□□□□□ -0.51
UBFD1-205ENST00000566136 ARMC2Q8NEN0 867 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 DACT1Q9NYF0 836 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 LRCH1Q9Y2L9 728 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
UBFD1-205ENST00000566136 LAMB4A4D0S4 1761 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 A0A1W2PPH5 198 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 DNAJA2O60884 412 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 PEX2P28328 305 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 HADHAP40939 763 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 CRKLP46109 303 aaKnown RBP11.83□□□□□ -0.52
UBFD1-205ENST00000566136 KRT32Q14532 448 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 NECTIN1Q15223 517 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 RABL6Q3YEC7 729 aaPredicted RBP11.83□□□□□ -0.52
UBFD1-205ENST00000566136 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 ZNF589Q86UQ0 364 aaPredicted RBP11.83□□□□□ -0.52
UBFD1-205ENST00000566136 CCDC83Q8IWF9 413 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 CMTR1Q8N1G2 835 aaKnown RBP11.83□□□□□ -0.52
UBFD1-205ENST00000566136 DEPTORQ8TB45 409 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 AFAP1L1Q8TED9 768 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 DBNDD2Q9BQY9 259 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 SEL1LQ9UBV2 794 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 GJD2Q9UKL4 321 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 A0A1W2PP55 124 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 PDIA3P30101 505 aaKnown RBP11.83□□□□□ -0.52
UBFD1-205ENST00000566136 RFC4P35249 363 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 TXLNAP40222 546 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 PDCD2Q16342 344 aaPredicted RBP11.83□□□□□ -0.52
UBFD1-205ENST00000566136 CFAP58Q5T655 872 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 TCEANC2Q96MN5 208 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 EMC7Q9NPA0 242 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 HERC5Q9UII4 1024 aaKnown RBP11.83□□□□□ -0.52
UBFD1-205ENST00000566136 GTF3C4Q9UKN8 822 aa11.83□□□□□ -0.52
UBFD1-205ENST00000566136 POTECB2RU33 542 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 DDX3YO15523 660 aaKnown RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 STAT1P42224 750 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 MAN2A2P49641 1150 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 ZNF445P59923 1031 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 MRPS35P82673 323 aaKnown RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 TCHHQ07283 1943 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 POTEHQ6S545 545 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 DNAJC10Q8IXB1 793 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 C18orf8Q96DM3 657 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 RBM18Q96H35 190 aaKnown RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 KCTD15Q96SI1 283 aaPredicted RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 TRIT1Q9H3H1 467 aaKnown RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 ARFGAP3Q9NP61 516 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 SERPINB13Q9UIV8 391 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 CYP46A1Q9Y6A2 500 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 WDR33Q9C0J8 1336 aaKnown RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 HIP1O00291 1037 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 CPLX1O14810 134 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 SLC27A2O14975 620 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 KRT9P35527 623 aa11.82□□□□□ -0.52
UBFD1-205ENST00000566136 SSR1P43307 286 aaKnown RBP11.82□□□□□ -0.52
UBFD1-205ENST00000566136 GABREP78334 506 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms