RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 SFR1Q86XK3 245 aa21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 MYOCDQ8IZQ8 938 aa21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 FAM161BQ96MY7 647 aa21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 KCNG1Q9UIX4 513 aa21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 FAM184BQ9ULE4 1060 aa21.09■□□□□ 0.97
CSPG4P13-201ENST00000565545 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 KBTBD13C9JR72 458 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 USO1O60763 962 aaKnown RBP21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 HIP1RO75146 1068 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 HOXD8P13378 290 aaPredicted RBP21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 RFC5P40937 340 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 NPEPPSP55786 919 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 TMEM63BQ5T3F8 832 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 MYCT1Q8N699 235 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 OR6J1Q8NGC5 347 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 ATP8B4Q8TF62 1192 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 KIFAP3Q92845 792 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 P2RX5Q93086 422 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 C17orf75Q9HAS0 396 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 LARSQ9P2J5 1176 aaKnown RBP21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 MAPK8IP1Q9UQF2 711 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 GNEQ9Y223 722 aaKnown RBP21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 NFE2L3Q9Y4A8 694 aa21.08■□□□□ 0.97
CSPG4P13-201ENST00000565545 RSPH10B2B2RC85 870 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 RSPH10BP0C881 870 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 CYBAP13498 195 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 MAPK7Q13164 816 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 TPD52L1Q16890 204 aaPredicted RBP21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 PRAMEF19Q5SWL8 479 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 FAM109BQ6ICB4 259 aaPredicted RBP21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 CENPPQ6IPU0 288 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 NOC3LQ8WTT2 800 aaKnown RBP21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 AFG1LQ8WV93 481 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 HPS3Q969F9 1004 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 MED15Q96RN5 788 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 ATP6V0A4Q9HBG4 840 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 PRDM5Q9NQX1 630 aaPredicted RBP21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 PDLIM7Q9NR12 457 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 ERAP1Q9NZ08 941 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 CUL9Q8IWT3 2517 aa21.07■□□□□ 0.96
CSPG4P13-201ENST00000565545 UBE4BO95155 1302 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 A0A0C4DFX4 3053 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 TMEM150BA6NC51 233 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 EIF3DO15371 548 aaKnown RBP eCLIP21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 PLS3P13797 630 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 STX17P56962 302 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 LRRC63Q05C16 580 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 ALCAMQ13740 583 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 TARBP2Q15633 366 aaKnown RBP21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 BMT2Q1RMZ1 405 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 MTERF2Q49AM1 385 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 EPM2AIP1Q7L775 607 aaPredicted RBP21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 FAM178BQ8IXR5 827 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 MRPL44Q9H9J2 332 aaKnown RBP21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 FANCLQ9NW38 375 aa21.06■□□□□ 0.96
CSPG4P13-201ENST00000565545 HBP1O60381 514 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 LGALS2P05162 132 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 MMP3P08254 477 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 AKR1A1P14550 325 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 PLCB4Q15147 1175 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 DGKDQ16760 1214 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 BRDTQ58F21 947 aaPredicted RBP21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 ODR4Q5SWX8 454 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 ZNF697Q5TEC3 545 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 SLC39A5Q6ZMH5 540 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 TRMT1LQ7Z2T5 733 aaKnown RBP21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 DAW1Q8N136 415 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 ZNF507Q8TCN5 953 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 GUCD1Q96NT3 240 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 TSG101Q99816 390 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 JPH2Q9BR39 696 aaPredicted RBP21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 HSD3B7Q9H2F3 369 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 DHX33Q9H6R0 707 aaKnown RBP21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 TBC1D7Q9P0N9 293 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 ZNF215Q9UL58 517 aaPredicted RBP21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 PCDHB13Q9Y5F0 798 aa21.05■□□□□ 0.96
CSPG4P13-201ENST00000565545 A6NJR5 290 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 SFI1A8K8P3 1242 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 SEPT4O43236 478 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 GAS2O43903 313 aaKnown RBP21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 FGFR1OPO95684 399 aaKnown RBP21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 ZNF18P17022 549 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 SCP2P22307 547 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 POLGP54098 1239 aaPredicted RBP21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 CCDC173Q0VFZ6 552 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 FAM102BQ5T8I3 360 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 TTI2Q6NXR4 508 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 PPP4R3CPQ6ZMV5 832 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 ZNF720Q7Z2F6 126 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 SCFD1Q8WVM8 642 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 SLC7A3Q8WY07 619 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 CEP89Q96ST8 783 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 AP5M1Q9H0R1 490 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 ST6GALNAC4Q9H4F1 302 aa21.04■□□□□ 0.96
CSPG4P13-201ENST00000565545 DYNC1LI2O43237 492 aaPredicted RBP21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 MAFO75444 373 aaPredicted RBP21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 GCNT3O95395 438 aa21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 CDK11BP21127 795 aaKnown RBP21.03■□□□□ 0.96
CSPG4P13-201ENST00000565545 ABCD1P33897 745 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms