RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 PPP4R1LQ9P1A2 415 aa5.92□□□□□ -1.46
PALB2-203ENST00000565038 SAE1Q9UBE0 346 aaPredicted RBP5.92□□□□□ -1.46
PALB2-203ENST00000565038 NOC2LQ9Y3T9 749 aaKnown RBP5.92□□□□□ -1.46
PALB2-203ENST00000565038 NPEPPSL1A6NEC2 478 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 KDM1AO60341 852 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 MAFO75444 373 aaPredicted RBP5.91□□□□□ -1.46
PALB2-203ENST00000565038 PCDH8O95206 1070 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 EYA4O95677 639 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 CLEC2LP0C7M8 214 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 POU3F3P20264 500 aaPredicted RBP5.91□□□□□ -1.46
PALB2-203ENST00000565038 EPHB4P54760 987 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 TMPRSS15P98073 1019 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 PLP2Q04941 152 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 ZNF827Q17R98 1081 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 ZNF568Q3ZCX4 644 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 RNF187Q5TA31 235 aaPredicted RBP5.91□□□□□ -1.46
PALB2-203ENST00000565038 AGBL4Q5VU57 503 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 CLRN3Q8NCR9 226 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 OR14K1Q8NGZ2 314 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 FERMT2Q96AC1 680 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 DYDC2Q96IM9 177 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 USP36Q9P275 1121 aaKnown RBP5.91□□□□□ -1.46
PALB2-203ENST00000565038 DNAI1Q9UI46 699 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 DENND2AQ9ULE3 1009 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 APOBEC2Q9Y235 224 aaKnown RBP5.91□□□□□ -1.46
PALB2-203ENST00000565038 NR2E1Q9Y466 385 aa5.91□□□□□ -1.46
PALB2-203ENST00000565038 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.9□□□□□ -1.46
PALB2-203ENST00000565038 PRSS38A1L453 326 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 BRINP1O60477 761 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 OPHN1O60890 802 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 SYN1P17600 705 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 PDCD1Q15116 288 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 GLB1LQ6UWU2 654 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 USP30Q70CQ3 517 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 BMP8AQ7Z5Y6 402 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 RASSF3Q86WH2 238 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 CXorf67Q86X51 503 aaPredicted RBP5.9□□□□□ -1.46
PALB2-203ENST00000565038 ATL2Q8NHH9 583 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 GNRHR2Q96P88 292 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 LMF1Q96S06 567 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 RBM15Q96T37 977 aaKnown RBP eCLIP5.9□□□□□ -1.46
PALB2-203ENST00000565038 NOL10Q9BSC4 688 aaKnown RBP5.9□□□□□ -1.46
PALB2-203ENST00000565038 PITHD1Q9GZP4 211 aaPredicted RBP5.9□□□□□ -1.46
PALB2-203ENST00000565038 MEGF9Q9H1U4 602 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 OR10A2Q9H208 303 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 VTA1Q9NP79 307 aa5.9□□□□□ -1.46
PALB2-203ENST00000565038 TOPORSQ9NS56 1045 aaPredicted RBP5.9□□□□□ -1.46
PALB2-203ENST00000565038 A0A0A6YYJ9 748 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 ST20-MTHFSA0A0A6YYL1 179 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 KRTAP9-7A8MTY7 169 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 ARHGAP6O43182 974 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 ULK1O75385 1050 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 ITGB3P05106 788 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 CELA3BP08861 270 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 CPEP16870 476 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 RAC3P60763 192 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 ACAP1Q15027 740 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 SLFN13Q68D06 897 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 IQSEC1Q6DN90 963 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 KLHDC10Q6PID8 442 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 WDR66Q8TBY9 1149 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 NEIL1Q96FI4 390 aaPredicted RBP5.89□□□□□ -1.47
PALB2-203ENST00000565038 DPYSL5Q9BPU6 564 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 SSBP3Q9BWW4 388 aaPredicted RBP5.89□□□□□ -1.47
PALB2-203ENST00000565038 SEC61A2Q9H9S3 476 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 POLR3BQ9NW08 1133 aaPredicted RBP5.89□□□□□ -1.47
PALB2-203ENST00000565038 USP18Q9UMW8 372 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 PPP2R3BQ9Y5P8 575 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 MYPNQ86TC9 1320 aa5.89□□□□□ -1.47
PALB2-203ENST00000565038 K7ESM1 405 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 MATN2O00339 956 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 HNRNPLP14866 589 aaKnown RBP eCLIP5.88□□□□□ -1.47
PALB2-203ENST00000565038 MANFP55145 182 aaKnown RBP5.88□□□□□ -1.47
PALB2-203ENST00000565038 SESN3P58005 492 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 CT83Q5H943 113 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 ERICH6BQ5W0A0 696 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 CCDC62Q6P9F0 684 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 DDX42Q86XP3 938 aaKnown RBP eCLIP5.88□□□□□ -1.47
PALB2-203ENST00000565038 CMIPQ8IY22 773 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 COG1Q8WTW3 980 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 NKD2Q969F2 451 aaPredicted RBP5.88□□□□□ -1.47
PALB2-203ENST00000565038 WDR92Q96MX6 357 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 C12orf65Q9H3J6 166 aaKnown RBP5.88□□□□□ -1.47
PALB2-203ENST00000565038 TMX1Q9H3N1 280 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 PRDM12Q9H4Q4 367 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 SYNPO2Q9UMS6 1093 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 VWA7Q9Y334 891 aa5.88□□□□□ -1.47
PALB2-203ENST00000565038 A0A0A6YYK5 440 aaPredicted RBP5.87□□□□□ -1.47
PALB2-203ENST00000565038 C2orf78A6NCI8 922 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 MAFGO15525 162 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 GPR42O15529 346 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 GPR39O43194 453 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 CDC14BO60729 498 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 H2AFYO75367 372 aaKnown RBP5.87□□□□□ -1.47
PALB2-203ENST00000565038 PFKMP08237 780 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 ATP2C1P98194 919 aaPredicted RBP5.87□□□□□ -1.47
PALB2-203ENST00000565038 NFYCQ13952 458 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 TAX1BP1Q86VP1 789 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 CFHR4Q92496 578 aa5.87□□□□□ -1.47
PALB2-203ENST00000565038 GFM2Q969S9 779 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms