RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 MYBPC2Q14324 1141 aa21.49■■□□□ 1.03
CLN6-205ENST00000564846 MTERF2Q49AM1 385 aa21.49■■□□□ 1.03
CLN6-205ENST00000564846 HVCN1Q96D96 273 aa21.49■■□□□ 1.03
CLN6-205ENST00000564846 FAM167AQ96KS9 214 aa21.49■■□□□ 1.03
CLN6-205ENST00000564846 NTPCRQ9BSD7 190 aaKnown RBP21.49■■□□□ 1.03
CLN6-205ENST00000564846 AGPAT3Q9NRZ7 376 aa21.49■■□□□ 1.03
CLN6-205ENST00000564846 CGNQ9P2M7 1197 aaKnown RBP21.49■■□□□ 1.03
CLN6-205ENST00000564846 ARMCX3Q9UH62 379 aaPredicted RBP21.49■■□□□ 1.03
CLN6-205ENST00000564846 PPME1Q9Y570 386 aa21.49■■□□□ 1.03
CLN6-205ENST00000564846 TLL2Q9Y6L7 1015 aa21.49■■□□□ 1.03
CLN6-205ENST00000564846 MYH11P35749 1972 aa21.49■■□□□ 1.03
CLN6-205ENST00000564846 SLC15A5A6NIM6 579 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 LGR5O75473 907 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 AKAP3O75969 853 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 SNRPFP62306 86 aaKnown RBP21.48■■□□□ 1.03
CLN6-205ENST00000564846 TAF1CQ15572 869 aaPredicted RBP21.48■■□□□ 1.03
CLN6-205ENST00000564846 HSDL1Q3SXM5 330 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 KSR1Q8IVT5 923 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 TMEM174Q8WUU8 243 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 PCMTD1Q96MG8 357 aaPredicted RBP21.48■■□□□ 1.03
CLN6-205ENST00000564846 SPATA33Q96N06 139 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 MKNK1Q9BUB5 465 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 SLC5A4Q9NY91 659 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 CAPN11Q9UMQ6 739 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 RBM47A0AV96 593 aaKnown RBP21.48■■□□□ 1.03
CLN6-205ENST00000564846 CLIC2O15247 247 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 TRIM21P19474 475 aaKnown RBP21.48■■□□□ 1.03
CLN6-205ENST00000564846 KRT9P35527 623 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 NPTX2P47972 431 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 POLGP54098 1239 aaPredicted RBP21.48■■□□□ 1.03
CLN6-205ENST00000564846 SLC9A9Q8IVB4 645 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 XPNPEP1Q9NQW7 623 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 PDGFCQ9NRA1 345 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 ABHD10Q9NUJ1 306 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.48■■□□□ 1.03
CLN6-205ENST00000564846 CPA4Q9UI42 421 aa21.48■■□□□ 1.03
CLN6-205ENST00000564846 LUC7L2Q9Y383 392 aaKnown RBP21.48■■□□□ 1.03
CLN6-205ENST00000564846 TTC26A0AVF1 554 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 SLC16A4O15374 487 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 FECHP22830 423 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 ABCD1P33897 745 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 PSMC2P35998 433 aaKnown RBP21.47■■□□□ 1.03
CLN6-205ENST00000564846 RFC5P40937 340 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 TAPT1Q6NXT6 567 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 PLPPR4Q7Z2D5 763 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 IFNL1Q8IU54 200 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 CCDC102AQ96A19 550 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 MAML3Q96JK9 1138 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 TTYH3Q9C0H2 523 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 DHX33Q9H6R0 707 aaKnown RBP21.47■■□□□ 1.03
CLN6-205ENST00000564846 KMT5AQ9NQR1 393 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 DMAC2Q9NW81 257 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 EXOC7Q9UPT5 735 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 SIK3Q9Y2K2 1263 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 ARID2Q68CP9 1835 aa21.47■■□□□ 1.03
CLN6-205ENST00000564846 A0A1W2PQJ5 194 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 CCDC169A6NNP5 214 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 OFD1O75665 1012 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 SLC26A2P50443 739 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 EMC2Q15006 297 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 CCAR2Q8N163 923 aaKnown RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 TMEM161BQ8NDZ6 487 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 SLC7A3Q8WY07 619 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 IFT74Q96LB3 600 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 GPBP1L1Q9HC44 474 aaPredicted RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 EMSYQ7Z589 1322 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 MYH9P35579 1960 aaKnown RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 PLXNA1Q9UIW2 1896 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 H0YCG3 227 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 CCP110O43303 1012 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 XRCC5P13010 732 aaKnown RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 LAMC2Q13753 1193 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 TARBP2Q15633 366 aaKnown RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 E4F1Q66K89 784 aaPredicted RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 C12orf56Q8IXR9 622 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 MSL3Q8N5Y2 521 aaKnown RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 BBXQ8WY36 941 aaPredicted RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 GLG1Q92896 1179 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 POLR3FQ9H1D9 316 aaPredicted RBP21.46■■□□□ 1.03
CLN6-205ENST00000564846 IKZF4Q9H2S9 585 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 FRMD4BQ9Y2L6 1034 aa21.46■■□□□ 1.03
CLN6-205ENST00000564846 RASSF10A6NK89 507 aa21.45■■□□□ 1.02
CLN6-205ENST00000564846 RNF225M0QZC1 329 aaPredicted RBP21.45■■□□□ 1.02
CLN6-205ENST00000564846 SCP2P22307 547 aa21.45■■□□□ 1.02
CLN6-205ENST00000564846 KLK7P49862 253 aa21.45■■□□□ 1.02
CLN6-205ENST00000564846 SREBF2Q12772 1141 aa21.45■■□□□ 1.02
CLN6-205ENST00000564846 ZNF397Q8NF99 534 aaPredicted RBP21.45■■□□□ 1.02
CLN6-205ENST00000564846 OR8K1Q8NGG5 319 aa21.45■■□□□ 1.02
CLN6-205ENST00000564846 CEP89Q96ST8 783 aa21.45■■□□□ 1.02
CLN6-205ENST00000564846 KATNBL1Q9H079 304 aa21.45■■□□□ 1.02
CLN6-205ENST00000564846 TBX20Q9UMR3 447 aa21.45■■□□□ 1.02
CLN6-205ENST00000564846 TLR2O60603 784 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 SNAI1O95863 264 aaPredicted RBP21.44■■□□□ 1.02
CLN6-205ENST00000564846 GH1P01241 217 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 CASP4P49662 377 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 SOX10P56693 466 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 KCNH2Q12809 1159 aa21.44■■□□□ 1.02
CLN6-205ENST00000564846 TSR1Q2NL82 804 aaKnown RBP21.44■■□□□ 1.02
CLN6-205ENST00000564846 TMTC1Q8IUR5 882 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms